The genome of the cucumber, Cucumis sativus L. S Huang, R Li, Z Zhang, LI Li, X Gu, W Fan, WJ Lucas, X Wang, B Xie, ... Nature genetics 41 (12), 1275-1281, 2009 | 1669 | 2009 |
KOBAS-i: intelligent prioritization and exploratory visualization of biological functions for gene enrichment analysis D Bu, H Luo, P Huo, Z Wang, S Zhang, Z He, Y Wu, L Zhao, J Liu, J Guo, ... Nucleic acids research 49 (W1), W317-W325, 2021 | 908 | 2021 |
A role for small RNAs in DNA double-strand break repair W Wei, Z Ba, M Gao, Y Wu, Y Ma, S Amiard, CI White, JMR Danielsen, ... Cell 149 (1), 101-112, 2012 | 657 | 2012 |
NONCODEV5: a comprehensive annotation database for long non-coding RNAs SS Fang, LL Zhang, JC Guo, YW Niu, Y Wu, H Li, LH Zhao, XY Li, ... Nucleic acids research 46 (D1), D308-D314, 2018 | 473 | 2018 |
SymMap: an integrative database of traditional Chinese medicine enhanced by symptom mapping Y Wu, F Zhang, K Yang, S Fang, D Bu, H Li, L Sun, H Hu, K Gao, W Wang, ... Nucleic acids research 47 (D1), D1110-D1117, 2019 | 350 | 2019 |
HERB: a high-throughput experiment-and reference-guided database of traditional Chinese medicine SS Fang, L Dong, L Liu, JC Guo, LH Zhao, JY Zhang, DC Bu, XK Liu, ... Nucleic acids research 49 (D1), D1197-D1206, 2021 | 325 | 2021 |
Recurrently deregulated lncRNAs in hepatocellular carcinoma Y Yang, L Chen, J Gu, H Zhang, J Yuan, Q Lian, G Lv, S Wang, Y Wu, ... Nature communications 8 (1), 14421, 2017 | 296 | 2017 |
Cytoplasmic assembly and selective nuclear import of Arabidopsis Argonaute4/siRNA complexes R Ye, W Wang, T Iki, C Liu, Y Wu, M Ishikawa, X Zhou, Y Qi Molecular cell 46 (6), 859-870, 2012 | 243 | 2012 |
NONCODEV6: an updated database dedicated to long non-coding RNA annotation in both animals and plants L Zhao, J Wang, Y Li, T Song, Y Wu, S Fang, D Bu, H Li, L Sun, D Pei, ... Nucleic acids research 49 (D1), D165-D171, 2021 | 194 | 2021 |
CNIT: a fast and accurate web tool for identifying protein-coding and long non-coding transcripts based on intrinsic sequence composition JC Guo, SS Fang, Y Wu, JH Zhang, Y Chen, J Liu, B Wu, JR Wu, EM Li, ... Nucleic acids research 47 (W1), W516-W522, 2019 | 129 | 2019 |
Function and Evolution of a MicroRNA That Regulates a Ca2+-ATPase and Triggers the Formation of Phased Small Interfering RNAs in Tomato Reproductive Growth Y Wang, A Itaya, X Zhong, Y Wu, J Zhang, E van der Knaap, R Olmstead, ... The Plant Cell 23 (9), 3185-3203, 2011 | 102 | 2011 |
Improved prediction of RNA secondary structure by integrating the free energy model with restraints derived from experimental probing data Y Wu, B Shi, X Ding, T Liu, X Hu, KY Yip, ZR Yang, DH Mathews, ZJ Lu Nucleic acids research 43 (15), 7247-7259, 2015 | 89 | 2015 |
Comprehensive analysis of long non-coding RNAs highlights their spatio-temporal expression patterns and evolutional conservation in Sus scrofa Z Tang, Y Wu, Y Yang, YCT Yang, Z Wang, J Yuan, Y Yang, C Hua, X Fan, ... Scientific Reports 7 (1), 43166, 2017 | 73 | 2017 |
DeepOmix: a scalable and interpretable multi-omics deep learning framework and application in cancer survival analysis L Zhao, Q Dong, C Luo, Y Wu, D Bu, X Qi, Y Luo, Y Zhao Computational and structural biotechnology journal 19, 2719-2725, 2021 | 55 | 2021 |
Protein-coding genes combined with long noncoding RNA as a novel transcriptome molecular staging model to predict the survival of patients with esophageal squamous cell carcinoma JC Guo, Y Wu, Y Chen, F Pan, ZY Wu, JS Zhang, JY Wu, XE Xu, JM Zhao, ... Cancer communications 38, 1-13, 2018 | 51 | 2018 |
microRNAs in a multicellular green alga Volvox carteri JR Li, Y Wu, YJ Qi Science China Life Sciences 57, 36-45, 2014 | 37 | 2014 |
FangNet: mining herb hidden knowledge from TCM clinical effective formulas using structure network algorithm D Bu, Y Xia, JY Zhang, W Cao, P Huo, Z Wang, Z He, L Ding, Y Wu, ... Computational and structural biotechnology journal 19, 62-71, 2021 | 32 | 2021 |
ncFANs v2. 0: an integrative platform for functional annotation of non-coding RNAs Y Zhang, D Bu, P Huo, Z Wang, H Rong, Y Li, J Liu, M Ye, Y Wu, Z Jiang, ... Nucleic Acids Research 49 (W1), W459-W468, 2021 | 17 | 2021 |
Using the NONCODE database resource L Xiyuan, B Dechao, S Liang, W Yang, F Shuangsang, L Hui, L Haitao, ... Current Protocols in Bioinformatics 58 (1), 12.16. 1-12.16. 19, 2017 | 17 | 2017 |
Multi-modality artificial intelligence in digital pathology Y Qiao, L Zhao, C Luo, Y Luo, Y Wu, S Li, D Bu, Y Zhao Briefings in Bioinformatics 23 (6), bbac367, 2022 | 14 | 2022 |