| Alterations in gut microbiome in cirrhosis as assessed by quantitative metagenomics: relationship with acute-on-chronic liver failure and prognosis C Solé, S Guilly, K Da Silva, M Llopis, E Le-Chatelier, P Huelin, M Carol, ... Gastroenterology 160 (1), 206-218. e13, 2021 | 139 | 2021 |
| Rifaximin-α reduces gut-derived inflammation and mucin degradation in cirrhosis and encephalopathy: RIFSYS randomised controlled trial VC Patel, S Lee, MJW McPhail, K Da Silva, S Guilly, A Zamalloa, ... Journal of hepatology 76 (2), 332-342, 2022 | 128 | 2022 |
| Benchmarking second and third-generation sequencing platforms for microbial metagenomics V Meslier, B Quinquis, K Da Silva, F Plaza Oñate, N Pons, H Roume, ... Scientific Data 9 (1), 694, 2022 | 48 | 2022 |
| Diet Supplementation with NUTRIOSE, a Resistant Dextrin, Increases the Abundance of Parabacteroides distasonis in the Human Gut F Thirion, K Da Silva, F Plaza Oñate, AS Alvarez, C Thabuis, N Pons, ... Molecular Nutrition & Food Research 66 (11), 2101091, 2022 | 13 | 2022 |
| The intellectual disability PAK3 R67C mutation impacts cognitive functions and adult hippocampal neurogenesis C Castillon, L Gonzalez, F Domenichini, S Guyon, K Da Silva, C Durand, ... Human molecular genetics 29 (12), 1950-1968, 2020 | 9 | 2020 |
| StrainFLAIR: strain-level profiling of metagenomic samples using variation graphs K Da Silva, N Pons, M Berland, F Plaza Oñate, M Almeida, P Peterlongo PeerJ 9, e11884, 2021 | 8 | 2021 |
| Long-term diosmectite use does not alter the gut microbiota in adults with chronic diarrhea K Da Silva, S Guilly, F Thirion, E Le Chatelier, N Pons, H Roume, ... BMC microbiology 22 (1), 1-11, 2022 | 4 | 2022 |
| Gut microbiome is profoundly altered in acute-on-chronic liver failure as evaluated by quantitative metagenomics. Relationship with liver cirrhosis severity C Sole, M Llopis, E Solà, K da Silva, S Guilly, E Le Chatelier, P Huelin, ... International Liver Congress (ILC) 68, 2, 2018 | 2 | 2018 |
| Identification and quantification of microbial strains in metagenomic samples using variation graphs K Da Silva Université de Rennes 1, 2022 | | 2022 |
| From genomics to metagenomics: benchmark of variation graphs K Da Silva, N Pons, M Berland, FP Oñate, M Almeida, P Peterlongo JOBIM 2019-Journées Ouvertes Biologie, Informatique et Mathématiques, 2019 | | 2019 |
