Collective growth in a small cell network JI Alsous, P Villoutreix, AM Berezhkovskii, SY Shvartsman Current Biology 27 (17), 2670-2676. e4, 2017 | 28 | 2017 |
Entropic effects in cell lineage tree packings J Imran Alsous, P Villoutreix, N Stoop, SY Shvartsman, J Dunkel Nature physics 14 (10), 1016-1021, 2018 | 27 | 2018 |
What machine learning can do for developmental biology P Villoutreix Development 148 (1), dev188474, 2021 | 26 | 2021 |
An integrated modelling framework from cells to organism based on a cohort of digital embryos P Villoutreix, J Delile, B Rizzi, L Duloquin, T Savy, P Bourgine, R Doursat, ... Scientific reports 6 (1), 37438, 2016 | 16 | 2016 |
Application of 3D MAPs pipeline identifies the morphological sequence chondrocytes undergo and the regulatory role of GDF5 in this process S Rubin, A Agrawal, J Stegmaier, S Krief, N Felsenthal, J Svorai, Y Addadi, ... Nature communications 12 (1), 5363, 2021 | 13 | 2021 |
Synthesizing developmental trajectories P Villoutreix, J Andén, B Lim, H Lu, IG Kevrekidis, A Singer, ... PLoS computational biology 13 (9), e1005742, 2017 | 12 | 2017 |
Randomness and variability in animal embryogenesis, a multi-scale approach P Villoutreix Paris Descartes University, 2015 | 5 | 2015 |
Cross-View kernel transfer R Huusari, C Capponi, P Villoutreix, H Kadri Pattern Recognition 129, 108759, 2022 | 3* | 2022 |
Random triangulated surfaces with arbitrary degree distribution reveal embryonic epithelial organization P Villoutreix Algebraic Topology - Methods, Computation and Science 6, 2014 | 2 | 2014 |
A probabilistic modeling of the cell lineage highlights interindividual variability in Paracentrotus lividus early development P Villoutreix, B Rizzi, J Delile, L Duloquin, E Faure, T Savy, P Bourgine, ... The Developmental Biology of the Sea Urchin XXII, 2014 | 2 | 2014 |
Vers une modélisation multi-échelle de la variabilité biologique P Villoutreix Modéliser & Simuler. Epistémologie et pratique de la modélisation et de la …, 0 | 2 | |
Random walk informed heterogeneity detection reveals how the lymph node conduit network influences T cells collective exploration behavior S Song, M Senoussi, P Escande, P Villoutreix PLoS Computational Biology 19 (5), e1011168, 2023 | 1* | 2023 |
Towards a general framework for spatio-temporal transcriptomics JP Lis, P Villoutreix, T Artières LMRL Workshop-NeurIPS 2020, 2020 | 1 | 2020 |
Partial label learning for automated classification of single-cell transcriptomic profiles M Senoussi, T Artieres, P Villoutreix PLOS Computational Biology 20 (4), e1012006, 2024 | | 2024 |
MOTL: enhancing multi-omics matrix factorization with transfer learning D Hirst, M Térézol, L Cantini, P Villoutreix, M Vignes, A Baudot bioRxiv, 2024.03. 22.586210, 2024 | | 2024 |
Bone elongation in the embryo occurs without column formation in the growth plate S Rubin, A Agrawal, A Seewald, P Villoutreix, A Baule, E Zelzer bioRxiv, 2023.11. 14.567062, 2023 | | 2023 |
Classification hiérarchique pour des données transcriptomiques faiblement supervisées M Senoussi, T Artieres, P Villoutreix Conférence sur l’Apprentissage Automatique, 2022 | | 2022 |
A quantitative framework to define normal embryonic development and its range of variation P Villoutreix, L Duloquin, B Rizzi, E Faure, T Savy, N Peyriéras The Developmental Biology of the Sea Urchin XXI, 2012 | | 2012 |