ViruSurf: an integrated database to investigate viral sequences A Canakoglu, P Pinoli, A Bernasconi, T Alfonsi, DP Melidis, S Ceri Nucleic acids research 49 (D1), D817-D824, 2021 | 50 | 2021 |
VirusViz: comparative analysis and effective visualization of viral nucleotide and amino acid variants A Bernasconi, A Gulino, T Alfonsi, A Canakoglu, P Pinoli, A Sandionigi, ... Nucleic Acids Research 49 (15), e90-e90, 2021 | 21 | 2021 |
CoV2K: A Knowledge Base of SARS-CoV-2 Variant Impacts R Al Khalaf, T Alfonsi, S Ceri, A Bernasconi Research Challenges in Information Science: 15th International Conference …, 2021 | 16 | 2021 |
CoV2K model, a comprehensive representation of SARS-CoV-2 knowledge and data interplay T Alfonsi, R Al Khalaf, S Ceri, A Bernasconi Scientific Data 9 (1), 1-12, 2022 | 11 | 2022 |
EpiSurf: metadata-driven search server for analyzing amino acid changes within epitopes of SARS-CoV-2 and other viral species A Bernasconi, L Cilibrasi, R Al Khalaf, T Alfonsi, S Ceri, P Pinoli, ... Database 2021, baab059, 2021 | 11 | 2021 |
Report on Omicron Spike mutations on epitopes and immunological/epidemiological/kinetics effects from literature A Bernasconi, P Pinoli, R Al Khalaf, T Alfonsi, A Canakoglu, L Cilibrasi, ... Availabe online: https://virological. org/t/report-on-omicron-spike …, 2021 | 7 | 2021 |
High Performance Integration Pipeline for Viral and Epitope Sequences T Alfonsi, P Pinoli, A Canakoglu BioTech 11 (1), 7, 2022 | 5 | 2022 |
Data-driven recombination detection in viral genomes T Alfonsi, A Bernasconi, M Chiara, S Ceri Nature Communications 15 (1), 3313, 2024 | 3 | 2024 |
Genomic data integration and user-defined sample-set extraction for population variant analysis T Alfonsi, A Bernasconi, A Canakoglu, M Masseroli BMC bioinformatics 23 (1), 1-33, 2022 | 3 | 2022 |
Expressing Biological Problems with Logical Reasoning Languages T Alfonsi, L Bellomarini, A Bernasconi, S Ceri CEUR WORKSHOP PROCEEDINGS 3229, 1-15, 2022 | 1 | 2022 |
SENSIBLE: Implementing Data-Driven Early Warning Systems for Future Viral Epidemics A Bernasconi, M Chiara, T Alfonsi, S Ceri | | 2024 |
VirusViz supplementary data A Bernasconi, A Gulino, T Alfonsi, A Canakoglu, P Pinoli, A Sandionigi, ... | | 2021 |
A unique approach to SARS-CoV-2 data and knowledge ingestion, integration and querying A Bernasconi, R Al Khalaf, T Alfonsi, A Canakoglu, L Cilibrasi, A Gulino, ... | | |