| Genome-wide survey of tissue-specific microRNA and transcription factor regulatory networks in 12 tissues Z Guo, M Maki, R Ding, Y Yang, B Zhang, L Xiong Scientific reports 4 (1), 5150, 2014 | 239 | 2014 |
| EnhancerDB: a resource of transcriptional regulation in the context of enhancers R Kang, Y Zhang, Q Huang, J Meng, R Ding, Y Chang, L Xiong, Z Guo Database 2019, bay141, 2019 | 40 | 2019 |
| Genome-wide identification and characterization of enhancers across 10 human tissues L Xiong, R Kang, R Ding, W Kang, Y Zhang, W Liu, Q Huang, J Meng, ... International journal of biological sciences 14 (10), 1321, 2018 | 31 | 2018 |
| Comprehensive expression profiling and functional network analysis of p53-regulated microRNAs in HepG2 cells treated with doxorubicin Y Yang, W Liu, R Ding, L Xiong, R Dou, Y Zhang, Z Guo PLoS One 11 (2), e0149227, 2016 | 25 | 2016 |
| Identification and analysis of P53-mediated competing endogenous RNA network in human hepatocellular carcinoma Y Zhang, R Kang, W Liu, Y Yang, R Ding, Q Huang, J Meng, L Xiong, ... International Journal of Biological Sciences 13 (9), 1213, 2017 | 22 | 2017 |
| scQTLbase: an integrated human single-cell eQTL database R Ding, Q Wang, L Gong, T Zhang, X Zou, K Xiong, Q Liao, M Plass, L Li Nucleic Acids Research 52 (D1), D1010-D1017, 2024 | 15 | 2024 |
| ipaQTL-atlas: an atlas of intronic polyadenylation quantitative trait loci across human tissues X Ma, S Cheng, R Ding, Z Zhao, XD Zou, S Guang, Q Wang, H Jing, C Yu, ... Nucleic Acids Research 51 (D1), D1046-D1052, 2023 | 11 | 2023 |
| Down-regulation expression of TGFB2-AS1 inhibits the proliferation, migration, invasion and induces apoptosis in HepG2 cells W Liu, R Huai, Y Zhang, S Rao, L Xiong, R Ding, C Mao, W Zhao, T Hao, ... Genes & genomics 41, 951-959, 2019 | 7 | 2019 |
| Transcriptome profiling analysis of differentially expressed mRNAs and lncRNAs in HepG2 cells treated with peptide 9R-P201 W Liu, R Ding, Y Zhang, C Mao, R Kang, J Meng, Q Huang, L Xiong, ... Biotechnology letters 39, 1639-1647, 2017 | 7 | 2017 |
| xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs R Ding, X Zou, Y Qin, L Gong, H Chen, X Ma, S Guang, C Yu, G Wang, ... Briefings in Bioinformatics 25 (1), bbad440, 2024 | 5 | 2024 |
| Gene network analyses unveil possible molecular basis underlying drug-induced glaucoma RF Ding, Q Yu, K Liu, J Du, HJ Yin, ZL Ji BMC medical genomics 14, 1-11, 2021 | 5 | 2021 |
| Determination of the amino acid recruitment order in early life by genome-wide analysis of amino acid usage bias M Zhao, R Ding, Y Liu, Z Ji, Y Zhao Biomolecules 12 (2), 171, 2022 | 4 | 2022 |
| Using population-scale transcriptomic and genomic data to map 3′ UTR alternative polyadenylation quantitative trait loci X Zou, R Ding, W Chen, G Wang, S Cheng, Q Wang, W Li, L Li STAR protocols 3 (3), 101566, 2022 | 3 | 2022 |
| Broad‐Spectrum Profiling of Drug Safety via Learning Complex Network K Liu, RF Ding, H Xu, YM Qin, QS He, F Du, Y Zhang, LX Yao, P You, ... Clinical Pharmacology & Therapeutics 107 (6), 1373-1382, 2020 | 3 | 2020 |
| A distinct class of pan-cancer susceptibility genes revealed by an alternative polyadenylation transcriptome-wide association study H Chen, Z Wang, L Gong, Q Wang, W Chen, J Wang, X Ma, R Ding, X Li, ... Nature Communications 15 (1), 1729, 2024 | 2 | 2024 |
| Immune-response 3′ UTR alternative polyadenylation quantitative trait loci contribute to variation in human complex traits and diseases L Li, X Ma, Y Cui, M Rotival, W Chen, X Zou, R Ding, Y Qin, Q Wang, ... Nature Communications 14 (1), 8347, 2023 | 2 | 2023 |
| Transcriptome sequencing analysis of hepatocellular carcinoma HepG2 cells induced by antitumor peptide 9R-P201 W LIU, R DING, Y ZHANG, Y LI, L LI, Z GUO Biotechnology Bulletin 33 (7), 210, 2017 | 2 | 2017 |
| eRNA-IDO: A One-stop Platform for Identification, Interactome Discovery, and Functional Annotation of Enhancer RNAs Y Zhang, L Gong, R Ding, W Chen, H Rong, Y Li, F Shameem, KA Ali, L Li, ... Genomics, Proteomics & Bioinformatics 22 (4), qzae059, 2024 | 1 | 2024 |
| Mining Real-World Big Data to Characterize Adverse Drug Reaction Quantitatively: Mixed Methods Study QX Yue, RF Ding, WH Chen, LY Wu, K Liu, ZL Ji Journal of Medical Internet Research 26, e48572, 2024 | 1 | 2024 |
| Nphos: Database and Predictor of Protein N-phosphorylation MX Zhao, RF Ding, Q Chen, J Meng, F Li, S Fu, B Huang, Y Liu, ZL Ji, ... Genomics, Proteomics & Bioinformatics, qzae032, 2024 | 1 | 2024 |
