Massively parallel whole genome amplification for single-cell sequencing using droplet microfluidics M Hosokawa, Y Nishikawa, M Kogawa, H Takeyama Scientific reports 7 (1), 5199, 2017 | 177 | 2017 |
Single-cell genomics of uncultured bacteria reveals dietary fiber responders in the mouse gut microbiota R Chijiiwa, M Hosokawa, M Kogawa, Y Nishikawa, K Ide, C Sakanashi, ... Microbiome 8, 1-14, 2020 | 124 | 2020 |
Droplet-based microfluidics for high-throughput screening of a metagenomic library for isolation of microbial enzymes M Hosokawa, Y Hoshino, Y Nishikawa, T Hirose, DH Yoon, T Mori, ... Biosensors and Bioelectronics 67, 379-385, 2015 | 114 | 2015 |
Obtaining high-quality draft genomes from uncultured microbes by cleaning and co-assembly of single-cell amplified genomes M Kogawa, M Hosokawa, Y Nishikawa, K Mori, H Takeyama Scientific reports 8 (1), 2059, 2018 | 89 | 2018 |
Monodisperse picoliter droplets for low-bias and contamination-free reactions in single-cell whole genome amplification Y Nishikawa, M Hosokawa, T Maruyama, K Yamagishi, T Mori, ... PLoS One 10 (9), e0138733, 2015 | 84 | 2015 |
High-throughput identification of peptide agonists against GPCRs by co-culture of mammalian reporter cells and peptide-secreting yeast cells using droplet microfluidics K Yaginuma, W Aoki, N Miura, Y Ohtani, S Aburaya, M Kogawa, ... Scientific Reports 9 (1), 10920, 2019 | 23 | 2019 |
Validation of the application of gel beads-based single-cell genome sequencing platform to soil and seawater Y Nishikawa, M Kogawa, M Hosokawa, R Wagatsuma, K Mineta, ... ISME Communications 2 (1), 92, 2022 | 22 | 2022 |
Single-cell metabolite detection and genomics reveals uncultivated talented producer M Kogawa, R Miyaoka, F Hemmerling, M Ando, K Yura, K Ide, ... PNAS Nexus 1 (1), pgab007, 2022 | 19 | 2022 |
Single-cell genomics of uncultured bacteria reveals dietary fiber responders in the mouse gut microbiota. Microbiome 8: 5 R Chijiiwa, M Hosokawa, M Kogawa, Y Nishikawa, K Ide, C Sakanashi, ... | 17 | 2020 |
Strain-level profiling of viable microbial community by selective single-cell genome sequencing M Hosokawa, T Endoh, K Kamata, K Arikawa, Y Nishikawa, M Kogawa, ... Scientific Reports 12 (1), 4443, 2022 | 15 | 2022 |
Targeted single-cell genomics reveals novel host adaptation strategies of the symbiotic bacteria Endozoicomonas in Acropora tenuis coral K Ide, Y Nishikawa, T Maruyama, Y Tsukada, M Kogawa, H Takeda, ... bioRxiv, 2022 | 12 | 2022 |
Identification of lipolytic enzymes using high-throughput single-cell screening and sorting of a metagenomic library A Alma’abadi, H Behzad, M Alarawi, D Conchouso, Y Saito, M Hosokawa, ... New Biotechnology 70, 102-108, 2022 | 9 | 2022 |
Integration of droplet microfluidic tools for single-cell functional metagenomics: an engineering head start D Conchouso, A Al-Ma’abadi, H Behzad, M Alarawi, M Hosokawa, ... Genomics, Proteomics and Bioinformatics 19 (3), 504-518, 2021 | 9 | 2021 |
Revealing within-species diversity in uncultured human gut bacteria with single-cell long-read sequencing M Kogawa, Y Nishikawa, T Saeki, T Yoda, K Arikawa, H Takeyama, ... Frontiers in Microbiology 14, 1133917, 2023 | 7 | 2023 |
Tools for microbial single-cell genomics for obtaining uncultured microbial genomes M Hosokawa, Y Nishikawa Biophysical Reviews 16 (1), 69-77, 2024 | 6 | 2024 |
Combined actions of bacteriophage-encoded genes in Wolbachia-induced male lethality H Arai, H Anbutsu, Y Nishikawa, M Kogawa, K Ishii, M Hosokawa, SR Lin, ... Iscience 26 (6), 2023 | 6 | 2023 |
Massively parallel single-cell genomics of microbiomes in rice paddies W Aoki, M Kogawa, S Matsuda, K Matsubara, S Hirata, Y Nishikawa, ... Frontiers in Microbiology 13, 1024640, 2022 | 6 | 2022 |
High-Quality Draft Genome Sequence of a Rickettsiales Bacterium Found in Acropora tenuis Coral from Okinawa, Japan K Ide, Y Nishikawa, M Kogawa, E Iwamoto, AZ Samuel, Y Nakano, ... Microbiology Resource Announcements 9 (48), 10.1128/mra. 00848-20, 2020 | 6 | 2020 |
Massively parallel single-cell genome sequencing enables high-resolution analysis of soil and marine microbiome Y Nishikawa, M Kogawa, M Hosokawa, K Mineta, K Takahashi, ... bioRxiv, 2020.03. 05.962001, 2020 | 5 | 2020 |
Male-killing-associated bacteriophage WO identified from comparisons of Wolbachia endosymbionts of Homona magnanima H Arai, H Anbutsu, Y Nishikawa, M Kogawa, K Ishii, M Hosokawa, SR Lin, ... Biorxiv, 2022.06. 12.495854, 2022 | 4 | 2022 |