Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer’s Disease, Parkinson’s Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis PH Nguyen, A Ramamoorthy, BR Sahoo, J Zheng, P Faller, JE Straub, ... Chemical Reviews 121 (4), 2545-2647, 2021 | 493 | 2021 |
Systematic coarse-graining methods for soft matter simulations–a review E Brini, EA Algaer, P Ganguly, C Li, F Rodríguez-Ropero, ... Soft Matter 9 (7), 2108-2119, 2013 | 396 | 2013 |
Convergence of sampling Kirkwood-Buff integrals of aqueous solutions with molecular dynamics simulations P Ganguly, NFA van der Vegt Journal of Chemical Theory and Computation 9 (3), 1347–1355, 2013 | 177 | 2013 |
Tau Assembly: The Dominant Role of PHF6 (VQIVYK) in Microtubule Binding Region Repeat R3 P Ganguly, TD Do, L Larini, NE LaPointe, AJ Sercel, MF Shade, ... The Journal of Physical Chemistry B 119 (13), 4582-4593, 2015 | 169 | 2015 |
Trimethylamine N-oxide Counteracts Urea Denaturation by Inhibiting Protein–Urea Preferential Interaction P Ganguly, P Boserman, NFA van der Vegt, JE Shea Journal of the American Chemical Society 140 (1), 483-492, 2018 | 114 | 2018 |
Signature of an aggregation-prone conformation of tau NA Eschmann, ER Georgieva, P Ganguly, PP Borbat, MD Rappaport, ... Scientific Reports 7, 44739, 2017 | 91 | 2017 |
Mutual Exclusion of Urea and Trimethylamine N-oxide from Amino Acids in Mixed Solvent Environment P Ganguly, T Hajari, JE Shea, NFA van der Vegt The Journal of Physical Chemistry Letters 6 (4), 581-585, 2015 | 88 | 2015 |
Kirkwood–Buff Coarse-Grained Force Fields for Aqueous Solutions P Ganguly, D Mukherji, C Junghans, NFA van der Vegt Journal of Chemical Theory and Computation 8 (5), 1802–1807, 2012 | 80 | 2012 |
Protein stability in TMAO and mixed urea–TMAO solutions P Ganguly, J Polák, NFA van der Vegt, J Heyda, JE Shea The Journal of Physical Chemistry B 124 (29), 6181-6197, 2020 | 64 | 2020 |
Ion Pairing in Aqueous Electrolyte Solutions with Biologically Relevant Anions P Ganguly, P Schravendijk, B Hess, NFA van der Vegt The Journal of Physical Chemistry B 115 (13), 3734–3739, 2011 | 62 | 2011 |
Hydrophobic Association in Mixed Urea–TMAO Solutions P Ganguly, NFA van der Vegt, JE Shea The Journal of Physical Chemistry Letters 7 (15), 3052-3059, 2016 | 59 | 2016 |
Representability and transferability of Kirkwood-Buff iterative Boltzmann inversion models for multicomponent aqueous systems P Ganguly, NFA van der Vegt Journal of Chemical Theory and Computation 9 (12), 5247–5256, 2013 | 46 | 2013 |
Distinct and Nonadditive Effects of Urea and Guanidinium Chloride on Peptide Solvation P Ganguly, JE Shea The Journal of Physical Chemistry Letters 10, 7406-7413, 2019 | 27 | 2019 |
Enthalpy-Entropy of Cation Association with the Acetate Anion in Water T Hajari, P Ganguly, NFA van der Vegt Journal of Chemical Theory and Computation 8 (10), 3804–3809, 2012 | 26 | 2012 |
Molecular Simulation Study on Hofmeister Cations and the Aqueous Solubility of Benzene P Ganguly, T Hajari, NFA van der Vegt The Journal of Physical Chemistry B 118 (20), 5331-5339, 2014 | 21 | 2014 |
Terminal capping of an amyloidogenic Tau fragment modulates its fibrillation propensity S Arya, P Ganguly, A Arsiccio, SL Claud, B Trapp, GE Schonfeld, X Liu, ... The Journal of Physical Chemistry B 124 (40), 8772-8783, 2020 | 20 | 2020 |
ADD Force Field for Sugars and Polyols: Predicting the Additivity of Protein–Osmolyte Interaction A Arsiccio, P Ganguly, L La Cortiglia, JE Shea, R Pisano The Journal of Physical Chemistry B 124 (36), 7779-7790, 2020 | 17 | 2020 |
Tachykinin Neuropeptides and Amyloid β (25–35) Assembly: Friend or Foe? X Liu, P Ganguly, Y Jin, MJ Jhatro, JE Shea, SK Buratto, MT Bowers Journal of the American Chemical Society 144 (32), 14614-14626, 2022 | 12 | 2022 |
Catalytic Cross Talk between Key Peptide Fragments That Couple Alzheimer’s Disease with Amyotrophic Lateral Sclerosis V Laos, D Bishop, P Ganguly, G Schonfeld, E Trapp, KL Cantrell, ... Journal of the American Chemical Society 143 (9), 3494-3502, 2021 | 12 | 2021 |
Cosolvent Exclusion Drives Protein Stability in Trimethylamine N-Oxide and Betaine Solutions P Ganguly, D Bubák, J Polák, P Fagan, M Dračínský, NFA van der Vegt, ... The Journal of Physical Chemistry Letters 13 (34), 7980-7986, 2022 | 8 | 2022 |