NASSAM: a server to search for and annotate tertiary interactions and motifs in three-dimensional structures of complex RNA molecules HY Hamdani, SD Appasamy, P Willett, PJ Artymiuk, M Firdaus-Raih Nucleic acids research 40 (W1), W35-W41, 2012 | 25 | 2012 |
InterRNA: a database of base interactions in RNA structures SD Appasamy, HY Hamdani, EI Ramlan, M Firdaus-Raih Nucleic acids research 44 (D1), D266-D271, 2016 | 24 | 2016 |
PDBe and PDBe‐KB: Providing high‐quality, up‐to‐date and integrated resources of macromolecular structures to support basic and applied research and education M Varadi, S Anyango, SD Appasamy, D Armstrong, M Bage, J Berrisford, ... Protein Science 31 (10), e4439, 2022 | 22 | 2022 |
Comparative sequence and structure analysis reveals the conservation and diversity of nucleotide positions and their associated tertiary interactions in the riboswitches SD Appasamy, EI Ramlan, M Firdaus-Raih PLoS One 8 (9), e73984, 2013 | 21 | 2013 |
Regulation of Glycine Cleavage and Detoxification by a Highly Conserved Glycine Riboswitch in Burkholderia spp. N Munyati-Othman, SD Appasamy, N Damiri, R Emrizal, NM Alipiah, ... Current Microbiology 78 (8), 2943-2955, 2021 | 5 | 2021 |
Annotating Macromolecular Complexes in the Protein Data Bank: Improving the FAIRness of Structure Data SD Appasamy, J Berrisford, R Gaborova, S Nair, S Anyango, S Grudinin, ... Scientific data 10 (1), 853, 2023 | 1 | 2023 |
R3DMCS: a web server for visualizing structural variation in RNA motifs across experimental 3D structures from the same organism or across species SD Appasamy, CL Zirbel Bioinformatics, btae682, 2024 | | 2024 |
R2DT: a comprehensive platform for visualising RNA secondary structure H McCann, CD Meade, LD Williams, AS Petrov, PZ Johnson, AE Simon, ... bioRxiv, 2024.09. 29.611006, 2024 | | 2024 |
Automating RNA 3D Motif Comparison and Functional Annotation of Ribosome Structures SD Appasamy Bowling Green State University, 2024 | | 2024 |