Balanced amino-acid-specific molecular dynamics force field for the realistic simulation of both folded and disordered proteins L Yu, DW Li, R Brüschweiler Journal of chemical theory and computation 16 (2), 1311-1318, 2019 | 45 | 2019 |
Functional protein dynamics on uncharted time scales detected by nanoparticle-assisted NMR spin relaxation M Xie, L Yu, L Bruschweiler-Li, X Xiang, AL Hansen, R Brüschweiler Science advances 5 (8), eaax5560, 2019 | 40 | 2019 |
IDPConformerGenerator: a flexible software suite for sampling the conformational space of disordered protein states JMC Teixeira, ZH Liu, A Namini, J Li, RM Vernon, M Krzeminski, ... The Journal of Physical Chemistry A 126 (35), 5985-6003, 2022 | 23 | 2022 |
Systematic differences between current molecular dynamics force fields to represent local properties of intrinsically disordered proteins L Yu, DW Li, R Brüschweiler The Journal of Physical Chemistry B 125 (3), 798-804, 2021 | 23 | 2021 |
Broadband dynamics of ubiquitin by anionic and cationic nanoparticle assisted NMR spin relaxation S Wardenfelt, X Xiang, M Xie, L Yu, L Bruschweiler‐Li, R Brüschweiler Angewandte Chemie 133 (1), 150-154, 2021 | 18 | 2021 |
Observation of sub-microsecond protein methyl-side chain dynamics by nanoparticle-assisted NMR spin relaxation X Xiang, AL Hansen, L Yu, G Jameson, L Bruschweiler-Li, C Yuan, ... Journal of the American Chemical Society 143 (34), 13593-13604, 2021 | 15 | 2021 |
The Intracellular Loop of the Na+/Ca2+ Exchanger Contains an “Awareness Ribbon”-Shaped Two-Helix Bundle Domain J Yuan, C Yuan, M Xie, L Yu, L Bruschweiler-Li, R Brüschweiler Biochemistry 57 (34), 5096-5104, 2018 | 13 | 2018 |
Quantitative prediction of ensemble dynamics, shapes and contact propensities of intrinsically disordered proteins L Yu, R Brüschweiler PLOS Computational Biology 18 (9), e1010036, 2022 | 9 | 2022 |
Cyclic peptide linker design and optimization by molecular dynamics simulations L Yu, SA Barros, C Sun, S Somani Journal of Chemical Information and Modeling 63 (21), 6863-6876, 2023 | 2 | 2023 |
Track: Integrating Techniques to Address Challenges in Protein Structural Biology Probing Functional Protein Methyl-Side Chain Dynamics on the Sub-Microsecond Time Scale by … X Xiang, A Hansen, L Yu, G Jameson, L Bruschweiler-Li, C Yuan, ... PROTEIN SCIENCE 32, 2023 | | 2023 |
Protein Disorder and Dynamics Studied by Molecular Dynamics Simulations and NMR L Yu The Ohio State University, 2021 | | 2021 |
OPTIMIZED MOLECULAR DYNAMICS FORCE FIELD REVEALS ATOMISTIC PATHWAYS OF SPONTANEOUS DISORDER-TO-ORDER PEPTIDE-PROTEIN BINDING L Yu, DW Li, R Bruschweiler PROTEIN SCIENCE 28, 33-33, 2019 | | 2019 |
Molecular Dynamics of Folded and Disordered Polypeptides in Comparison with Nuclear Magnetic Resonance Measurement L Yu The Ohio State University, 2018 | | 2018 |