| TPRpred: a tool for prediction of TPR-, PPR-and SEL1-like repeats from protein sequences MR Karpenahalli, AN Lupas, J Söding BMC bioinformatics 8, 1-8, 2007 | 239 | 2007 |
| Multiple peaks and reciprocal sign epistasis in an empirically determined genotype-phenotype landscape A Dawid, DJ Kiviet, M Kogenaru, M De Vos, SJ Tans Chaos: An Interdisciplinary Journal of Nonlinear Science 20 (2), 2010 | 47 | 2010 |
| Origin of a folded repeat protein from an intrinsically disordered ancestor H Zhu, E Sepulveda, MD Hartmann, M Kogenaru, A Ursinus, E Sulz, ... Elife 5, e16761, 2016 | 44 | 2016 |
| An improved Escherichia colistrain to host gene regulatory networks involving both the AraC and LacI inducible transcription factors M Kogenaru, SJ Tans Journal of biological engineering 8, 1-5, 2014 | 37 | 2014 |
| Revealing evolutionary pathways by fitness landscape reconstruction M Kogenaru, MGJ de Vos, SJ Tans Critical reviews in biochemistry and molecular biology 44 (4), 169-174, 2009 | 37 | 2009 |
| A universal deep-learning model for zinc finger design enables transcription factor reprogramming DM Ichikawa, O Abdin, N Alerasool, M Kogenaru, AL Mueller, H Wen, ... Nature Biotechnology 41 (8), 1117-1129, 2023 | 28 | 2023 |
| Sign epistasis caused by hierarchy within signalling cascades P Nghe, M Kogenaru, SJ Tans Nature communications 9 (1), 1451, 2018 | 27 | 2018 |
| Drug-Inducible Control of Lethality Genes: A Low Background Destabilizing Domain Architecture Applied to the Gal4-UAS System in Drosophila M Kogenaru, M Isalan ACS synthetic biology 7 (6), 1496-1506, 2018 | 15 | 2018 |
| Predicting evolution using regulatory architecture P Nghe, MGJ de Vos, E Kingma, M Kogenaru, FJ Poelwijk, L Laan, ... Annual Review of Biophysics 49 (1), 181-197, 2020 | 9 | 2020 |
| Predicting Evolutionary Constraints by Identifying Conflicting Demands in Regulatory Networks M Kogenaru, P Nghe, FJ Poelwijk, SJ Tans Cell systems 10 (6), 526-534. e3, 2020 | 4 | 2020 |
| A drug stabilizable GAL80ds for conditional control of gene expression via GAL4-UAS and CRISPR-Cas9 systems in Drosophila V Kogenaru, M Isalan, M Kogenaru Scientific Reports 14 (1), 5893, 2024 | 1 | 2024 |
| Engineered transcription-associated Cas9 targeting in eukaryotic cells GW Goldberg, M Kogenaru, S Keegan, MAB Haase, L Kagermazova, ... bioRxiv, 2023 | | 2023 |
| Evolutionary constraints in regulatory networks defined by partial order between phenotypes M Kogenaru, P Nghe, FJ Poelwijk, SJ Tans bioRxiv, 722520, 2019 | | 2019 |
| Origin of a folded protein from an intrinsically disordered ancestral peptide H Zhu, E Sepulveda, MD Hartmann, M Kogenaru, J Martin, AN Lupas PeerJ PrePrints, 2017 | | 2017 |
| Mechanistic understanding of the regulatory network adaptation M Kogenaru, P Nghe, FJ Poelwijk, SJ Tans Dutch meeting on Molecular and Cellular Biophysics, 2010 | | 2010 |
| Evolution of phenotypic plasticity in a synthetic regulatory network. M Kogenaru, P Nghe, FJ Poelwijk, SJ Tans The fourth annual q-bio conference on cellular information processing, 2010 | | 2010 |
| Evolutionary adaptation in variable environments M Kogenaru, FJ Poelwijk, R de Leeuw, P Nghe, SJ Tans Quantitative Evolutionary and Comparative Genomics, 2010 | | 2010 |
| A synthetic regulatory cascade for quantitative studies M Kogenaru, SJ Tans The third annual q-bio conference on cellular information processing, 2009 | | 2009 |
| A synthetic regulatory cascade M Kogenaru, SJ Tans Dutch meeting on Molecular and Cellular Biophysics, 2008 | | 2008 |
| Exploring protein domain evolution by designing new TPR-like domains MR Karpenahalli Tübingen, Univ., Diss., 2006, 2006 | | 2006 |
Sander J. TansAMOLF institute Amsterdam, Delft University of Technology在 amolf.nl 的电子邮件经过验证
