| Challenges in long-term imaging and quantification of single-cell dynamics S Skylaki, O Hilsenbeck, T Schroeder Nature Biotechnology 34 (11), 1137-1144, 2016 | 228 | 2016 |
| Early myeloid lineage choice is not initiated by random PU. 1 to GATA1 protein ratios PS Hoppe, M Schwarzfischer, D Loeffler, KD Kokkaliaris, O Hilsenbeck, ... Nature 535 (7611), 299-302, 2016 | 225 | 2016 |
| Prospective identification of hematopoietic lineage choice by deep learning F Buggenthin, F Buettner, PS Hoppe, M Endele, M Kroiss, M Strasser, ... Nature methods 14 (4), 403-406, 2017 | 198 | 2017 |
| Software tools for single-cell tracking and quantification of cellular and molecular properties O Hilsenbeck, M Schwarzfischer, S Skylaki, B Schauberger, PS Hoppe, ... Nature biotechnology 34 (7), 703-706, 2016 | 191 | 2016 |
| An automatic method for robust and fast cell detection in bright field images from high-throughput microscopy F Buggenthin, C Marr, M Schwarzfischer, PS Hoppe, O Hilsenbeck, ... BMC bioinformatics 14, 1-12, 2013 | 184 | 2013 |
| Network plasticity of pluripotency transcription factors in embryonic stem cells A Filipczyk, C Marr, S Hastreiter, J Feigelman, M Schwarzfischer, ... Nature cell biology 17 (10), 1235-1246, 2015 | 153 | 2015 |
| Asymmetric lysosome inheritance predicts activation of haematopoietic stem cells D Loeffler, A Wehling, F Schneiter, Y Zhang, N Müller-Bötticher, ... Nature 573 (7774), 426-429, 2019 | 144 | 2019 |
| fastER: a user-friendly tool for ultrafast and robust cell segmentation in large-scale microscopy O Hilsenbeck, M Schwarzfischer, D Loeffler, S Dimopoulos, S Hastreiter, ... Bioinformatics 33 (13), 2020-2028, 2017 | 74 | 2017 |
| Inflammatory signals directly instruct PU. 1 in HSCs via TNF M Etzrodt, N Ahmed, PS Hoppe, D Loeffler, S Skylaki, O Hilsenbeck, ... Blood, The Journal of the American Society of Hematology 133 (8), 816-819, 2019 | 69 | 2019 |
| Identification of factors promoting ex vivo maintenance of mouse hematopoietic stem cells by long-term single-cell quantification KD Kokkaliaris, E Drew, M Endele, D Loeffler, PS Hoppe, O Hilsenbeck, ... Blood, The Journal of the American Society of Hematology 128 (9), 1181-1192, 2016 | 36 | 2016 |
| Inductive and selective effects of GSK3 and MEK inhibition on Nanog heterogeneity in embryonic stem cells S Hastreiter, S Skylaki, D Loeffler, A Reimann, O Hilsenbeck, PS Hoppe, ... Stem cell reports 11 (1), 58-69, 2018 | 32 | 2018 |
| Mouse and human HSPC immobilization in liquid culture by CD43-or CD44-antibody coating D Loeffler, W Wang, A Hopf, O Hilsenbeck, PE Bourgine, F Rudolf, I Martin, ... Blood, The Journal of the American Society of Hematology 131 (13), 1425-1429, 2018 | 31 | 2018 |
| CSF-1–induced Src signaling can instruct monocytic lineage choice M Endele, D Loeffler, KD Kokkaliaris, O Hilsenbeck, S Skylaki, PS Hoppe, ... Blood, The Journal of the American Society of Hematology 129 (12), 1691-1701, 2017 | 29 | 2017 |
| A novel GATA2 protein reporter mouse reveals hematopoietic progenitor cell types N Ahmed, L Kunz, PS Hoppe, D Loeffler, M Etzrodt, GC Ortega, ... Stem Cell Reports 15 (2), 326-339, 2020 | 13 | 2020 |
| Blood stem cell PU. 1 upregulation is a consequence of differentiation without fast autoregulation N Ahmed, M Etzrodt, P Dettinger, T Kull, D Loeffler, PS Hoppe, JS Chavez, ... The Journal of Experimental Medicine 219 (1), 2022 | 8 | 2022 |
| Publisher Correction: Asymmetric lysosome inheritance predicts activation of haematopoietic stem cells D Loeffler, A Wehling, F Schneiter, Y Zhang, N Müller-Bötticher, ... Nature 573 (7775), E5-E5, 2019 | 6 | 2019 |
| Maximally interesting extremal regions (MINER) and a prohabilistic model für cell tracking O Hilsenbeck | 1 | 2014 |
| 2032-DYNAMICS QUANTIFICATION OF TRANSCRIPTION FACTOR SWITCHES IN HSPC LINEAGE CHOICE N Ahmed, M Etzrodt, P Dettinger, T Kull, D Loeffler, P Hoppe, ... Experimental Hematology 76, S50, 2019 | | 2019 |
| Aactivation of haematopoietic stem cells A Wehling, F Schneiter, Y Zhang, PS Hoppe, O Hilsenbeck, ... | | 2019 |
| Computational methods for quantitative single-cell time-lapse microscopy O Hilsenbeck ETH Zurich, 2019 | | 2019 |
