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Atul Rangadurai
Atul Rangadurai
CIHR postdoctoral fellow at the Hospital for Sick Children
在 sickkids.ca 的电子邮件经过验证
标题
引用次数
引用次数
年份
DNA mismatches reveal conformational penalties in protein–DNA recognition
A Afek, H Shi, A Rangadurai, H Sahay, A Senitzki, S Xhani, M Fang, ...
Nature 587 (7833), 291-296, 2020
962020
High-performance virtual screening by targeting a high-resolution RNA dynamic ensemble
LR Ganser, J Lee, A Rangadurai, DK Merriman, ML Kelly, AD Kansal, ...
Nature structural & molecular biology 25 (5), 425-434, 2018
952018
2′-O-Methylation can increase the abundance and lifetime of alternative RNA conformational states
H Abou Assi, AK Rangadurai, H Shi, B Liu, MC Clay, K Erharter, C Kreutz, ...
Nucleic acids research 48 (21), 12365-12379, 2020
802020
Characterizing micro-to-millisecond chemical exchange in nucleic acids using off-resonance R1ρ relaxation dispersion
A Rangadurai, ES Szymaski, IJ Kimsey, H Shi, HM Al-Hashimi
Progress in nuclear magnetic resonance spectroscopy 112, 55-102, 2019
672019
Insights into Watson–Crick/Hoogsteen breathing dynamics and damage repair from the solution structure and dynamic ensemble of DNA duplexes containing m1A
B Sathyamoorthy, H Shi, H Zhou, Y Xue, A Rangadurai, DK Merriman, ...
Nucleic acids research 45 (9), 5586-5601, 2017
662017
Rapid and accurate determination of atomistic RNA dynamic ensemble models using NMR and structure prediction
H Shi, A Rangadurai, H Abou Assi, R Roy, DA Case, D Herschlag, ...
Nature communications 11 (1), 5531, 2020
622020
NMR Chemical Exchange Measurements Reveal That N6-Methyladenosine Slows RNA Annealing
H Shi, B Liu, F Nussbaumer, A Rangadurai, C Kreutz, HM Al-Hashimi
Journal of the American Chemical Society 141 (51), 19988-19993, 2019
532019
Atomic structures of excited state A–T Hoogsteen base pairs in duplex DNA by combining NMR relaxation dispersion, mutagenesis, and chemical shift calculations
H Shi, MC Clay, A Rangadurai, B Sathyamoorthy, DA Case, ...
Journal of biomolecular NMR 70, 229-244, 2018
382018
Extending the sensitivity of CEST NMR spectroscopy to micro‐to‐millisecond dynamics in nucleic acids using high‐power radio‐frequency fields
A Rangadurai, H Shi, HM Al‐Hashimi
Angewandte Chemie International Edition 59 (28), 11262-11266, 2020
312020
A quantitative model predicts how m6A reshapes the kinetic landscape of nucleic acid hybridization and conformational transitions
B Liu, H Shi, A Rangadurai, F Nussbaumer, CC Chu, KA Erharter, ...
Nature communications 12 (1), 5201, 2021
302021
Why are Hoogsteen base pairs energetically disfavored in A-RNA compared to B-DNA?
A Rangadurai, H Zhou, DK Merriman, N Meiser, B Liu, H Shi, ...
Nucleic acids research 46 (20), 11099-11114, 2018
302018
Environmental effects on guanine-thymine mispair tautomerization explored with quantum mechanical/molecular mechanical free energy simulations
P Li, A Rangadurai, HM Al-Hashimi, S Hammes-Schiffer
Journal of the American Chemical Society 142 (25), 11183-11191, 2020
292020
Mapping the per-residue surface electrostatic potential of CAPRIN1 along its phase-separation trajectory
Y Toyama, AK Rangadurai, JD Forman-Kay, LE Kay
Proceedings of the National Academy of Sciences 119 (36), e2210492119, 2022
282022
Probing conformational transitions towards mutagenic Watson–Crick-like G·T mismatches using off-resonance sugar carbon R relaxation dispersion
A Rangadurai, ES Szymanski, I Kimsey, H Shi, HM Al-Hashimi
Journal of Biomolecular NMR 74, 457-471, 2020
252020
5‐Oxyacetic Acid Modification Destabilizes Double Helical Stem Structures and Favors Anionic Watson–Crick like cmo5U‐G Base Pairs
E Strebitzer, A Rangadurai, R Plangger, J Kremser, MA Juen, M Tollinger, ...
Chemistry–A European Journal 24 (71), 18903-18906, 2018
212018
Direct evidence for (G) O6··· H2-N4 (C)+ hydrogen bonding in transient G (syn)-C+ and G (syn)-m5C+ Hoogsteen base pairs in duplex DNA from cytosine amino nitrogen off-resonance …
A Rangadurai, J Kremser, H Shi, C Kreutz, HM Al-Hashimi
Journal of magnetic resonance 308, 106589, 2019
172019
Probing the hydrogen-bonding environment of individual bases in DNA duplexes with isotope-edited infrared spectroscopy
RJ Fick, AY Liu, F Nussbaumer, C Kreutz, A Rangadurai, Y Xu, ...
The Journal of Physical Chemistry B 125 (28), 7613-7627, 2021
142021
Measurement of 1Hα transverse relaxation rates in proteins: application to solvent PREs
Y Toyama, AK Rangadurai, LE Kay
Journal of Biomolecular NMR 76 (4), 137-152, 2022
122022
Surface electrostatics dictate RNA-binding protein CAPRIN1 condensate concentration and hydrodynamic properties
Y Toyama, AK Rangadurai, JD Forman-Kay, LE Kay
Journal of Biological Chemistry 299 (1), 2023
112023
Measuring thermodynamic preferences to form non-native conformations in nucleic acids using ultraviolet melting
A Rangadurai, H Shi, Y Xu, B Liu, H Abou Assi, JD Boom, H Zhou, ...
Proceedings of the National Academy of Sciences 119 (24), e2112496119, 2022
11*2022
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