| In vitro reconstitution of mevalonate pathway and targeted engineering of farnesene overproduction in Escherichia coli F Zhu, X Zhong, M Hu, L Lu, Z Deng, T Liu Biotechnology and bioengineering 111 (7), 1396-1405, 2014 | 211 | 2014 |
| Metabolic engineering of fatty acyl-ACP reductase-dependent pathway to improve fatty alcohol production in Escherichia coli R Liu, F Zhu, L Lu, A Fu, J Lu, Z Deng, T Liu Metabolic engineering 22, 10-21, 2014 | 120 | 2014 |
| O-Pair Search with MetaMorpheus for O-glycopeptide characterization L Lu, NM Riley, MR Shortreed, CR Bertozzi, LM Smith Nature Methods 17 (11), 1133-1138, 2020 | 117 | 2020 |
| Structures of human O-GlcNAcase and its complexes reveal a new substrate recognition mode B Li, H Li, L Lu, J Jiang Nature structural & molecular biology 24 (4), 362-369, 2017 | 94 | 2017 |
| Engineering an iterative polyketide pathway in Escherichia coli results in single-form alkene and alkane overproduction Q Liu, K Wu, Y Cheng, L Lu, E Xiao, Y Zhang, Z Deng, T Liu Metabolic engineering 28, 82-90, 2015 | 83 | 2015 |
| Targeted engineering and scale up of lycopene overproduction in Escherichia coli F Zhu, L Lu, S Fu, X Zhong, M Hu, Z Deng, T Liu Process Biochemistry 50 (3), 341-346, 2015 | 80 | 2015 |
| Identification of MS-cleavable and noncleavable chemically cross-linked peptides with MetaMorpheus L Lu, RJ Millikin, SK Solntsev, Z Rolfs, M Scalf, MR Shortreed, LM Smith Journal of proteome research 17 (7), 2370-2376, 2018 | 60 | 2018 |
| Electrophilic probes for deciphering substrate recognition by O-GlcNAc transferase CW Hu, M Worth, D Fan, B Li, H Li, L Lu, X Zhong, Z Lin, L Wei, Y Ge, L Li, ... Nature chemical biology 13 (12), 1267-1273, 2017 | 36 | 2017 |
| Spritz: a proteogenomic database engine AJ Cesnik, RM Miller, K Ibrahim, L Lu, RJ Millikin, MR Shortreed, BL Frey, ... Journal of proteome research 20 (4), 1826-1834, 2020 | 31 | 2020 |
| Distributive O-GlcNAcylation on the highly repetitive C-terminal domain of RNA polymerase II L Lu, D Fan, CW Hu, M Worth, ZX Ma, J Jiang Biochemistry 55 (7), 1149-1158, 2016 | 30 | 2016 |
| HOTMAQ: a multiplexed absolute quantification method for targeted proteomics X Zhong, Q Yu, F Ma, DC Frost, L Lu, Z Chen, H Zetterberg, C Carlsson, ... Analytical chemistry 91 (3), 2112-2119, 2019 | 19 | 2019 |
| Mesh fragmentation improves dissociation efficiency in top-down proteomics L Lu, M Scalf, MR Shortreed, LM Smith Journal of the American Society for Mass Spectrometry 32 (6), 1319-1325, 2021 | 9 | 2021 |
| De novo design of drug-binding proteins with predictable binding energy and specificity L Lu, X Gou, SK Tan, SI Mann, H Yang, X Zhong, D Gazgalis, J Valdiviezo, ... Science 384 (6691), 106-112, 2024 | 3 | 2024 |
| Binary Classifier for Computing Posterior Error Probabilities in MetaMorpheus MR Shortreed, RJ Millikin, L Lu, Z Rolfs, RM Miller, LV Schaffer, BL Frey, ... Journal of Proteome Research 20 (4), 1997-2004, 2021 | 1 | 2021 |
| Quantitative proteome-wide O-glycoproteomics analysis with FragPipe DA Polasky, L Lu, F Yu, K Li, MR Shortreed, LM Smith, AI Nesvizhskii Analytical and Bioanalytical Chemistry, 1-10, 2024 | | 2024 |
| Novel Data Analysis Approaches for Cross-linking Mass Spectrometry Proteomics and Glycoproteomics L Lu The University of Wisconsin-Madison, 2020 | | 2020 |
