| Host-glycan metabolism is regulated by a species-conserved two-component system in Streptococcus pneumoniae PR Andreassen, C Trappetti, V Minhas, FD Nielsen, K Pakula, JC Paton, ... PLoS pathogens 16 (3), e1008332, 2020 | 17 | 2020 |
| Adding context to the pneumococcal core genes using bioinformatic analysis of the intergenic pangenome of Streptococcus pneumoniae FD Nielsen, J Møller-Jensen, MG Jørgensen Frontiers in Bioinformatics 3, 1074212, 2023 | 3 | 2023 |
| Global transcriptional responses of pneumococcus to human blood components and cerebrospinal fluid JS Pettersen, FF Høg, FD Nielsen, J Møller-Jensen, MG Jørgensen Frontiers in Microbiology 13, 1060583, 2022 | 3 | 2022 |
| Development and Clinical Application of a Multilocus Sequence Typing Scheme for Bacteroides fragilis Based on Whole-Genome Sequencing Data FD Nielsen, MN Skov, TV Sydenham, US Justesen Microbiology Spectrum 11 (2), e05111-22, 2023 | 2 | 2023 |
| The uncharacterized PA3040-3042 operon is part of the cell envelope stress response and a tobramycin resistance determinant in a clinical isolate of Pseudomonas aeruginosa MZ Østergaard, FD Nielsen, MH Meinfeldt, CL Kirkpatrick Microbiology Spectrum 12 (8), e03875-23, 2024 | 1 | 2024 |
| Adding context to the pneumococcal core genes – a bioinformatic analysis of the intergenic pangenome of Streptococcus pneumoniae FD Nielsen, J Møller-Jensen, MG Jørgensen bioRxiv, 2021.08. 29.458057, 2021 | 1 | 2021 |
| A comprehensive analysis of pneumococcal two-component system regulatory networks JS Pettersen, FD Nielsen, PR Andreassen, J Møller-Jensen, ... NAR Genomics and Bioinformatics 6 (2), lqae039, 2024 | | 2024 |
| Long read 16S rRNA gene sequencing evaluated as a routine diagnostic tool improves bacterial taxonomic resolution and reduce costs SL Larsen, KG Thomsen, SV Høgh, K Steinke, FD Nielsen, TV Sydenham, ... | | 2024 |
| 60 years of evolution in Bacteroides fragilis antimicrobial resistance FD Nielsen, TV Sydenham, US Justesen | | 2024 |
| Nanopore-based 16S rRNA gene sequencing improves bacterial identification in clinical samples compared to Sanger sequencing KG Thomsen, SL Larsen, SV Høgh, K Steinke, FD Nielsen, M Skov, ... | | 2024 |
| Caught in the act: a case of plasmid-mediated transfer of metronidazole resistance in a human abscess FD Nielsen, TV Sydenham, TM Leegaard, US Justesen | | 2023 |
| User-friendly bioinformatics for routine analysis of bacterial isolate sequencing in a clinical setting K Steinke, FD Nielsen, KG Thomsen, SL Larsen, SV Høgh, M Skov, ... | | 2023 |
Patrick Rosendahl AndreassenUniversity of Sourthern Denmark在 bmb.sdu.dk 的电子邮件经过验证
