A physical, genetic and functional sequence assembly of the barley genome. KF Mayer, R Waugh, P Langridge, TJ Close, RP Wise, A Graner, ... Nature 491, 711-716, 2012 | 1547 | 2012 |
The molecular landscape of colorectal cancer cell lines unveils clinically actionable kinase targets E Medico, M Russo, G Picco, C Cancelliere, E Valtorta, G Corti, ... Nature communications 6 (1), 7002, 2015 | 307 | 2015 |
The GreatSPN tool: recent enhancements S Baarir, M Beccuti, D Cerotti, M De Pierro, S Donatelli, G Franceschinis ACM SIGMETRICS Performance Evaluation Review 36 (4), 4-9, 2009 | 174 | 2009 |
State‐of‐the‐art fusion‐finder algorithms sensitivity and specificity M Carrara, M Beccuti, F Lazzarato, F Cavallo, F Cordero, S Donatelli, ... BioMed research international 2013 (1), 340620, 2013 | 109 | 2013 |
30 years of GreatSPN EG Amparore, G Balbo, M Beccuti, S Donatelli, G Franceschinis Principles of Performance and Reliability Modeling and Evaluation: Essays in …, 2016 | 91 | 2016 |
Reproducible bioinformatics project: a community for reproducible bioinformatics analysis pipelines N Kulkarni, L Alessandrì, R Panero, M Arigoni, M Olivero, G Ferrero, ... BMC bioinformatics 19, 5-13, 2018 | 76 | 2018 |
State of art fusion-finder algorithms are suitable to detect transcription-induced chimeras in normal tissues? M Carrara, M Beccuti, F Cavallo, S Donatelli, F Lazzarato, F Cordero, ... BMC bioinformatics 14, 1-11, 2013 | 73 | 2013 |
Quantification of dependencies between electrical and information infrastructures M Beccuti, S Chiaradonna, F Di Giandomenico, S Donatelli, ... International Journal of Critical Infrastructure Protection 5 (1), 14-27, 2012 | 73 | 2012 |
Complete Results for the 2015 Edition of the Model Checking Contest F Kordon, H Garavel, LM Hillah, F Hulin-Hubard, A Linard, M Beccuti, ... | 50 | 2015 |
GreatSPN enhanced with decision diagram data structures J Babar, M Beccuti, S Donatelli, A Miner Applications and Theory of Petri Nets: 31st International Conference, PETRI …, 2010 | 46 | 2010 |
Sequencing of 15 622 gene‐bearing BAC s clarifies the gene‐dense regions of the barley genome M Muñoz‐Amatriaín, S Lonardi, MC Luo, K Madishetty, JT Svensson, ... The Plant Journal 84 (1), 216-227, 2015 | 44 | 2015 |
Integrative analysis of novel metabolic subtypes in pancreatic cancer fosters new prognostic biomarkers L Follia, G Ferrero, G Mandili, M Beccuti, D Giordano, R Spadi, MA Satolli, ... Frontiers in oncology 9, 115, 2019 | 41 | 2019 |
Optimizing a massive parallel sequencing workflow for quantitative miRNA expression analysis F Cordero, M Beccuti, M Arigoni, S Donatelli, RA Calogero PLoS One 7 (2), e31630, 2012 | 37 | 2012 |
Sparsely-connected autoencoder (SCA) for single cell RNAseq data mining L Alessandri, F Cordero, M Beccuti, N Licheri, M Arigoni, M Olivero, ... NPJ systems biology and applications 7 (1), 1, 2021 | 36 | 2021 |
(Stochastic) model checking in GreatSPN EG Amparore, M Beccuti, S Donatelli Application and Theory of Petri Nets and Concurrency: 35th International …, 2014 | 32 | 2014 |
Markov decision Petri net and Markov decision well-formed net formalisms M Beccuti, G Franceschinis, S Haddad International Conference on Application and Theory of Petri Nets, 43-62, 2007 | 31 | 2007 |
Luminal breast cancer-specific circular RNAs uncovered by a novel tool for data analysis LC Tarrero, G Ferrero, V Miano, C De Intinis, L Ricci, M Arigoni, ... Oncotarget 9 (18), 14580, 2018 | 29 | 2018 |
SeqBox: RNAseq/ChIPseq reproducible analysis on a consumer game computer M Beccuti, F Cordero, M Arigoni, R Panero, EG Amparore, S Donatelli, ... Bioinformatics 34 (5), 871-872, 2018 | 28 | 2018 |
Alternative splicing detection workflow needs a careful combination of sample prep and bioinformatics analysis M Carrara, J Lum, F Cordero, M Beccuti, M Poidinger, S Donatelli, ... BMC bioinformatics 16, 1-13, 2015 | 26 | 2015 |
Chimera: a Bioconductor package for secondary analysis of fusion products M Beccuti, M Carrara, F Cordero, F Lazzarato, S Donatelli, F Nadalin, ... Bioinformatics 30 (24), 3556-3557, 2014 | 26 | 2014 |