| Large-scale cis- and trans-eQTL analyses identify thousands of genetic loci and polygenic scores that regulate blood gene expression Nature Genetics, 2021 | 845* | 2021 |
| scPred: accurate supervised method for cell-type classification from single-cell RNA-seq data J Alquicira-Hernandez, A Sathe, HP Ji, Q Nguyen, JE Powell Genome biology 20 (1), 1-17, 2019 | 238 | 2019 |
| Benchmarking of cell type deconvolution pipelines for transcriptomics data F Avila Cobos, J Alquicira-Hernandez, JE Powell, P Mestdagh, ... Nature communications 11 (1), 5650, 2020 | 209 | 2020 |
| Human splicing diversity and the extent of unannotated splice junctions across human RNA-seq samples on the Sequence Read Archive A Nellore, AE Jaffe, JP Fortin, J Alquicira-Hernández, L Collado-Torres, ... Genome biology 17, 1-14, 2016 | 110 | 2016 |
| Single-cell eQTL mapping identifies cell type–specific genetic control of autoimmune disease S Yazar, J Alquicira-Hernandez, K Wing, A Senabouth, MG Gordon, ... Science 376 (6589), eabf3041, 2022 | 103 | 2022 |
| Nebulosa recovers single-cell gene expression signals by kernel density estimation J Alquicira-Hernandez, JE Powell Bioinformatics, 2021 | 88 | 2021 |
| Rail-RNA: scalable analysis of RNA-seq splicing and coverage A Nellore, L Collado-Torres, AE Jaffe, J Alquicira-Hernández, C Wilks, ... Bioinformatics 33 (24), 4033-4040, 2017 | 78 | 2017 |
| ascend: R package for analysis of single-cell RNA-seq data A Senabouth, SW Lukowski, JA Hernandez, SB Andersen, X Mei, ... GigaScience 8 (8), giz087, 2019 | 45 | 2019 |
| DevKidCC allows for robust classification and direct comparisons of kidney organoid datasets SB Wilson, SE Howden, JM Vanslambrouck, A Dorison, ... Genome Medicine 14 (1), 1-25, 2022 | 11 | 2022 |
| No evidence that plasmablasts transdifferentiate into developing neutrophils in severe COVID‐19 disease J Alquicira‐Hernandez, JE Powell, TG Phan Clinical & Translational Immunology 10 (7), e1308, 2021 | 9 | 2021 |
| Tracking the clonal dynamics of SARS-CoV-2-specific T cells in children and adults with mild/asymptomatic COVID-19 WH Khoo, K Jackson, C Phetsouphanh, JJ Zaunders, ... Clinical Immunology 246, 109209, 2023 | 5 | 2023 |
| Single-cell RNA-sequencing reveals widespread personalized, context-specific gene expression regulation in immune cells R Oelen, DH de Vries, H Brugge, G Gordon, M Vochteloo, ... bioRxiv, 2021.06. 04.447088, 2021 | 5 | 2021 |
| Programmatic access to bacterial regulatory networks with regutools J Chávez, C Barberena-Jonas, JE Sotelo-Fonseca, ... Bioinformatics 36 (16), 4532-4534, 2020 | 3 | 2020 |
| Mapping the dynamic genetic regulatory architecture of HLA genes at single-cell resolution JB Kang, AZ Shen, S Sakaue, Y Luo, S Gurajala, A Nathan, L Rumker, ... medRxiv, 2023.03. 14.23287257, 2023 | 1 | 2023 |
| EP16. 03-041 Single Cell RNA Sequencing Reveals Phenotypic Predispositions to Developing Lung Cancer in Never-Smokers V Chin, H Arora, A Senabouth, JA Hernandez, R McCloy, J Simes, ... Journal of Thoracic Oncology 17 (9), S608, 2022 | | 2022 |
| Understanding genetic control of gene expression and its role in disease at a single cell resolution J Alquicira Hernandez | | 2022 |
| Clonal dynamics of SARS-CoV-2-specific T cells in children and adults with COVID-19 WH Khoo, K Jackson, C Phetsouphanh, JJ Zaunders, ... bioRxiv, 2022.01. 30.478400, 2022 | | 2022 |
Joseph E PowellGarvan Institute of Medical Research and University of New South Wales在 garvan.org.au 的电子邮件经过验证
