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Muhammad Asif
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引用次数
年份
Identification of Neurotransmission and Synaptic Biological Processes Disrupted in Autism Spectrum Disorder Using Interaction Networks and Community Detection Analysis
J Vilela, H Martiniano, AR Marques, JX Santos, M Asif, C Rasga, ...
Biomedicines 11 (11), 2971, 2023
2023
Machine learning for synergistic network pharmacology: a comprehensive overview
F Noor, M Asif, UA Ashfaq, M Qasim, M Tahir ul Qamar
Briefings in Bioinformatics, bbad120, 2023
372023
scRNAseq_KNIME workflow: A Customizable, Locally Executable, Interactive and Automated KNIME workflow for single-cell RNA seq
S Kausar, M Asif, A Baudot
bioRxiv, 2023.01. 14.524084, 2023
2023
ShIVA, a user-friendly and interactive interface giving biologists control over their single-cell RNA-seq data.
R Aussel, M Asif, S Chenag, S Jaeger, P Milpied, L Spinelli
bioRxiv, 2022.09. 20.508636, 2022
42022
Comprehensive computational analysis reveals YXXΦ [I/L/M/F/V] motif and YXXΦ-like tetrapeptides across HFRS causing Hantaviruses and their association with viral pathogenesis …
F Noor, U Ashfaq, M Asif, M Adeel, A Alshammari, M Alharbi
Frontiers in immunology 13, 2022
42022
Biomedical knowledge graph embeddings for personalized medicine: Predicting disease-gene associations
H Vilela, J. Asif, M. Marques, AR. Santos, JX. Rasga, C. Vicente, A. Martiniano
Expert Systems, 2022
11*2022
DGH-GO: Dissecting the Genetic Heterogeneity of complex diseases using Gene Ontology
M Asif, H Martiniano, A Lamurias, S Kausar, F Couto
bioRxiv, 2022
12022
A Role for Gene-Environment Interactions in Autism Spectrum Disorder Is Supported by Variants in Genes Regulating the Effects of Exposure to Xenobiotics
JX Santos, C Rasga, AR Marques, H Martiniano, M Asif, J Vilela, ...
Frontiers in Neuroscience 16, 2022
192022
Light-emitting diodes effect on Aspergillus species in filtered surface water: DNA damage, proteome response and potential reactivation
BR Oliveira, AP Marques, M Asif, MTB Crespo, VJ Pereira
Environmental Pollution 287, 117553, 2021
52021
Biomedical Knowledge Graph Embeddings for Personalized Medicine
J Vilela, M Asif, AR Marques, JX Santos, C Rasga, A Vicente, ...
EPIA Conference on Artificial Intelligence, 584-595, 2021
12021
Identification of biological mechanisms underlying a multidimensional ASD phenotype using machine learning
M Asif, HFMC Martiniano, AR Marques, JX Santos, J Vilela, C Rasga, ...
Translational psychiatry 10 (1), 1-12, 2020
262020
Network propagation-based semi-supervised identification of genes associated with autism spectrum disorder
HFMC Martiniano, M Asif, AM Vicente, L Correia
International Meeting on Computational Intelligence Methods for …, 2020
42020
FunVar: A systematic pipeline to unravel the convergence patterns of genetic variants in ASD, a paradigmatic complex disease
M Asif, AM Vicente, FM Couto
Journal of biomedical informatics 98, 103273, 2019
42019
Establishing genotype-phenotype associations for ASD
ACG Ilheu, M Asif, FM Couto
EUROPEAN JOURNAL OF HUMAN GENETICS 27, 1422-1423, 2019
2019
An integrative approach to correlate clinical presentation patterns in Autism Spectrum Disorder with biological processes disrupted by Copy Number Variants (CNV) in brain genes
M Asif, H Martiniano, C Rasga, AR Marques, JX Santos, G Oliveira, ...
EUROPEAN JOURNAL OF HUMAN GENETICS 27, 569-569, 2019
2019
Autism Spectrum Disorder: gene variants involved in the nonsense-mediated mRNA decay pathway
AR Marques, H Martiniano, JX Santos, J Vilela, M Asif, C Rasga, ...
52nd European Human Genetics (ESHG) Conference, 15-18 June 2019, 2019
2019
Adapting the ELEAT (Early Life Exposure Assessment Tool) to Portugal–a pilot study to tackle gene-environment interactions in Autism Spectrum Disorder
C Rasga, ALLJX Santos, AR Marques, J Vilela, M Asif, G Oliveira, ...
bioRxiv, 520593, 2019
2019
Identification of disease risk variants in neurotransmission and synaptic genes in Autism Spectrum Disorder
J Vilela, H Martiniano, S Luzia, AR Marques, J Santos, M Asif, C Rasga, ...
XVI Meeting of the Portuguese Society for Neurosciences, 30 maio-1 junho 2019, 2019
2019
Identifying disease genes using machine learning and gene functional similarities, assessed through Gene Ontology
M Asif, HF Martiniano, AM Vicente, FM Couto
PloS one 13 (12), e0208626, 2018
892018
Evidence for a role of nonsense-mediated mRNA decay pathway genes in Autism Spectrum Disorder
A Marques, H Martiniano, JX Santos, J Vilela, M Asif, G Oliveira, L Romão, ...
22ª Reunião Anual da Sociedade Portuguesa de Genética Humana, 15-17 novembro …, 2018
2018
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