| Single-cell multiregion dissection of Alzheimer’s disease H Mathys, CA Boix, LA Akay, Z Xia, J Davila-Velderrain, AP Ng, X Jiang, ... Nature, 1-11, 2024 | | 2024 |
| Single-cell multi-cohort dissection of the schizophrenia transcriptome WB Ruzicka, S Mohammadi, JF Fullard, J Davila-Velderrain, S Subburaju, ... Science 384 (6698), eadg5136, 2024 | 14 | 2024 |
| Systematic investigation of allelic regulatory activity of schizophrenia-associated common variants JC McAfee, S Lee, J Lee, JL Bell, O Krupa, J Davis, K Insigne, ML Bond, ... Cell Genomics 3 (10), 2023 | 13 | 2023 |
| Uncovering the role that specific genes play in reachability properties of complex biological Gene Regulatory Networks (GRNs): The Arabidopsis thaliana flower development case JE Chairez-Veloz, EC Chávez-Hernández, J Dávila-Velderrain, ... bioRxiv, 2023.05. 30.542986, 2023 | | 2023 |
| Clarifying the biological nature of the interaction between the systems-based epigenetic landscape and the epigenome JL Caldú-Primo, J Dávila-Velderrain, JC Martınez-Garcıa, ... Proceedings of International Conference on Bioinfor 92, 82-91, 2023 | | 2023 |
| Uncovering the particularities of the dynamical interaction between cancer-related Epithelial-Mesenchymal Transition and the Mammalian Cell Cycle: a feedback-based Boolean … L Juárez-Ramiro, J Dávila-Velderrain, A Soria-López, ER Álvarez-Buylla, ... Proceedings of International Conference on Bioin 92, 1-10, 2023 | | 2023 |
| Lateral mammillary body neurons in mouse brain are disproportionately vulnerable in Alzheimer’s disease WC Huang, Z Peng, MH Murdock, L Liu, H Mathys, J Davila-Velderrain, ... Science translational medicine 15 (692), eabq1019, 2023 | 2 | 2023 |
| Dissecting the neurotropism and neurovirulence of MPXV using human stem cell-based models L Bauer, S Giussani, N Palazzi, F Zare, E Colombo, F Pinci, L Leijten, ... bioRxiv, 2023.08. 25.554849, 2023 | 1 | 2023 |
| APOE4 impairs myelination via cholesterol dysregulation in oligodendrocytes JW Blanchard, LA Akay, J Davila-Velderrain, D von Maydell, H Mathys, ... Nature 611 (7937), 769-779, 2022 | 214 | 2022 |
| Neurons burdened by DNA double-strand breaks incite microglia activation through antiviral-like signaling in neurodegeneration GM Welch, CA Boix, E Schmauch, J Davila-Velderrain, MB Victor, ... Science Advances 8 (39), eabo4662, 2022 | 42 | 2022 |
| Apoe4 impairs myelination via altered cholesterol biosynthesis and transport in oligodendroglia J Blanchard, M Kellis, LH Tsai, JD Velderrain, L Akay, D Von Maydell, ... US Patent App. 17/694,630, 2022 | | 2022 |
| BACE-1 inhibition facilitates the transition from homeostatic microglia to DAM-1 N Singh, MR Benoit, J Zhou, B Das, J Davila-Velderrain, M Kellis, LH Tsai, ... Science Advances 8 (24), eabo1286, 2022 | 38 | 2022 |
| Author Correction: Expanded encyclopaedias of DNA elements in the human and mouse genomes JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ... Nature 605 (7909), E3-E3, 2022 | 8 | 2022 |
| Author Correction: Perspectives on ENCODE (Nature,(2020), 583, 7818,(693-698), 10.1038/s41586-020-2449-8) FBC Abascal, R Acosta, NJ Addleman, J Adrian, V Afzal, B Aken, R Ai, ... Springer Nature, 2022 | | 2022 |
| Gene Regulatory Network Dynamical Logical Models for Plant Development J Dávila-Velderrain, JL Caldú-Primo, JC Martínez-García, ... Plant Systems Biology: Methods and Protocols, 59-77, 2021 | 1 | 2021 |
| MEF2 is a key regulator of cognitive potential and confers resilience to neurodegeneration SJ Barker, RM Raju, NEP Milman, J Wang, J Davila-Velderrain, ... Science translational medicine 13 (618), eabd7695, 2021 | 54 | 2021 |
| Patient-derived bone marrow spheroids reveal leukemia-initiating cells supported by mesenchymal hypoxic niches in pediatric B-ALL JC Balandrán, J Dávila-Velderrain, A Sandoval-Cabrera, ... Frontiers in Immunology 12, 746492, 2021 | 16 | 2021 |
| In vivo and in vitro human gene essentiality estimations capture contrasting functional constraints JL Caldu-Primo, JA Verduzco-Martínez, ER Alvarez-Buylla, ... NAR Genomics and Bioinformatics 3 (3), 2021 | 3 | 2021 |
| Single-cell anatomical analysis of human hippocampus and entorhinal cortex uncovers early-stage molecular pathology in Alzheimer’s disease J Davila-Velderrain, H Mathys, S Mohammadi, B Ruzicka, X Jiang, A Ng, ... bioRxiv, 2021.07. 01.450715, 2021 | 14 | 2021 |
| NEBULA is a fast negative binomial mixed model for differential or co-expression analysis of large-scale multi-subject single-cell data L He, J Davila-Velderrain, TS Sumida, DA Hafler, M Kellis, AM Kulminski Communications biology 4 (1), 629, 2021 | 72 | 2021 |
