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Neelanjan Mukherjee
Neelanjan Mukherjee
University of Colorado School of Medicine
在 cuanschutz.edu 的电子邮件经过验证 - 首页
标题
引用次数
年份
Systematic analysis of nonsense variants uncovers peptide release rate as a novel modifier of nonsense-mediated mRNA decay efficiency
D Kolakada, R Fu, N Biziaev, A Shuvalov, M Lore, AE Campbell, ...
bioRxiv, 2024
2024
PDGFRα signaling regulates Srsf3 transcript binding to affect PI3K signaling and endosomal trafficking
TE Forman, MP Sajek, ED Larson, N Mukherjee, KA Fantauzzo
bioRxiv, 2024
2024
Ribosome Profiling Reveals Translational Reprogramming via mTOR Activation in Omacetaxine Resistant Multiple Myeloma
ZJ Walker, KF Vaeth, A Baldwin, DJ Ohlstrom, LT Reiman, BM Idler, ...
bioRxiv, 2024.04. 23.590843, 2024
2024
In Situ Reconstruction Of Distinct Normal And Pathological Cell Populations Within The Human Adrenal Gland Using Spatial Transcriptomics
F Rui, K Walters, K Koc, A Baldwin, K Kiseljak-Vassiliades, LM Fishbein, ...
Journal of the Endocrine Society 7 (Supplement_1), bvad114. 156, 2023
2023
Small-molecule Ro-08-2750 interacts with many RNA-binding proteins and elicits MUSASHI2-independent phenotypes
K Walters, MP Sajek, E Murphy, A Issaian, A Baldwin, E Harrison, ...
RNA 29 (10), 1458-1470, 2023
2023
Transcriptomic response dynamics of human primary and immortalized adrenocortical cells to steroidogenic stimuli
K Wellman, R Fu, A Baldwin, J Rege, E Murphy, WE Rainey, N Mukherjee
Cells 10 (9), 2376, 2021
82021
RNA-binding proteins regulate aldosterone homeostasis in human steroidogenic cells
R Fu, K Wellman, A Baldwin, J Rege, K Walters, A Hirsekorn, K Riemondy, ...
RNA 27 (8), 933-945, 2021
62021
An Easy, Cost‐Effective, and Scalable Method to Deplete Human Ribosomal RNA for RNA‐seq
A Baldwin, AR Morris, N Mukherjee
Current Protocols 1 (6), e176, 2021
15*2021
ELAVL1 primarily couples mRNA stability with the 3′ UTRs of interferon-stimulated genes
K Rothamel, S Arcos, B Kim, C Reasoner, S Lisy, N Mukherjee, M Ascano
Cell reports 35 (8), 2021
482021
Towards a deeper annotation of human lncRNAs
MW Szcześniak, E Wanowska, N Mukherjee, U Ohler, I Makałowska
Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms 1863 (4), 194385, 2020
132020
Global identification of functional microRNA-mRNA interactions in Drosophila
HH Wessels, S Lebedeva, A Hirsekorn, R Wurmus, A Akalin, N Mukherjee, ...
Nature communications 10 (1), 1626, 2019
482019
Deciphering human ribonucleoprotein regulatory networks
N Mukherjee, HH Wessels, S Lebedeva, M Sajek, M Ghanbari, A Garzia, ...
Nucleic acids research 47 (2), 570-581, 2019
612019
SSMART: sequence-structure motif identification for RNA-binding proteins
A Munteanu, N Mukherjee, U Ohler
Bioinformatics 34 (23), 3990-3998, 2018
222018
Long non-coding RNAs as modulators of splicing in trans via direct RNA: RNA interactions
MW Szczesniak, E Wanowska, M Kubiak, N Mukherjee, U Ohler, ...
Acta Biochimica Polonica 65 (S2), 2018
2018
Characteristics of human lncRNA transcripts across cell lines
M Szczesniak, N Mukherjee, O Bryzghalov, U Ohler, I Makalowska
FEBS JOURNAL 284, 171-171, 2017
2017
DDX54 regulates transcriptome dynamics during DNA damage response
M Milek, K Imami, N Mukherjee, F De Bortoli, U Zinnall, O Hazapis, ...
Genome research 27 (8), 1344-1359, 2017
592017
Integrative classification of human coding and noncoding genes through RNA metabolism profiles
N Mukherjee, L Calviello, A Hirsekorn, S de Pretis, M Pelizzola, U Ohler
Nature structural & molecular biology 24 (1), 86-96, 2017
1752017
Delivery of therapeutics targeting the mRNA-binding protein HuR using 3DNA nanocarriers suppresses ovarian tumor growth
YH Huang, W Peng, N Furuuchi, J Gerhart, K Rhodes, N Mukherjee, ...
Cancer research 76 (6), 1549-1559, 2016
932016
Detecting actively translated open reading frames in ribosome profiling data
L Calviello, N Mukherjee, E Wyler, H Zauber, A Hirsekorn, M Selbach, ...
Nature methods 13 (2), 165-170, 2016
4012016
Identifying RBP targets with RIP-seq
HH Wessels, A Hirsekorn, U Ohler, N Mukherjee
Post-Transcriptional Gene Regulation, 141-152, 2016
122016
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