| Introduction to Data Science (for not-yet-scientists) F Huber | | 2024 |
| Reliable cross-ion mode chemical similarity prediction between MS2 spectra N de Jonge, D Joas, LJ Truong, JJJ van der Hooft, F Huber bioRxiv, 2024.03. 25.586580, 2024 | | 2024 |
| Reproducible MS/MS library cleaning pipeline in matchms NF de Jonge, H Hecht, JJJ van der Hooft, F Huber | 3 | 2023 |
| Artificial intelligence for natural product drug discovery MW Mullowney, KR Duncan, SS Elsayed, N Garg, JJJ van der Hooft, ... Nature Reviews Drug Discovery 22 (11), 895-916, 2023 | 66 | 2023 |
| MS2Query NF de Jonge, JJR Louwen, F Huber, JJJ van der Hooft | | 2023 |
| MS2Query: reliable and scalable MS2 mass spectra-based analogue search NF de Jonge, JJR Louwen, E Chekmeneva, S Camuzeaux, FJ Vermeir, ... Nature Communications 14 (1), 1752, 2023 | 25 | 2023 |
| Unified and standardized mass spectrometry data processing in Python using spectrum_utils W Bittremieux, L Levitsky, M Pilz, T Sachsenberg, F Huber, M Wang, ... Journal of proteome research 22 (2), 625-631, 2023 | 7 | 2023 |
| Mass2SMILES: deep learning based fast prediction of structures and functional groups directly from high-resolution MS/MS spectra. D Elser, F Huber, E Gaquerel bioRxiv, 2023.07. 06.547963, 2023 | 3 | 2023 |
| Towards automated video-based assessment of dystonia in dyskinetic cerebral palsy: a novel approach using markerless motion tracking and machine learning H Haberfehlner, SS van de Ven, SA van der Burg, F Huber, ... Frontiers in Robotics and AI 10, 25, 2023 | 5 | 2023 |
| Good practices and recommendations for using and benchmarking computational metabolomics metabolite annotation tools NF de Jonge, K Mildau, D Meijer, JJR Louwen, C Bueschl, F Huber, ... Metabolomics 18 (12), 103, 2022 | 34 | 2022 |
| Short Lecture “Mass spectrometry-based sample vectorization for exploration of large chemodiverse datasets and efficient identification of new antiparasitic compounds” A Gaudry, F Huber, J Flückiger, L Quirós, A Rutz, M Kaiser, A Grondin, ... Planta Medica 88 (15), SL-F04, 2022 | | 2022 |
| Comparison of cosine, modified cosine, and neutral loss based spectrum alignment for discovery of structurally related molecules W Bittremieux, R Schmid, F Huber, JJJ van der Hooft, M Wang, ... Journal of the American Society for Mass Spectrometry 33 (9), 1733-1744, 2022 | 29 | 2022 |
| MEMO: mass spectrometry-based sample vectorization to explore chemodiverse datasets A Gaudry, F Huber, LF Nothias, S Cretton, M Kaiser, JL Wolfender, ... Frontiers in Bioinformatics 2, 842964, 2022 | 12 | 2022 |
| Discovering boolean functions on actin networks A Adamatzky, S Siccardi, F Huber, J Schnauß, J Tuszyński Handbook of Unconventional Computing: VOLUME 2: Implementations, 103-148, 2022 | 1 | 2022 |
| EB3-informed dynamics of the microtubule stabilizing cap during stalled growth M Kok, F Huber, SM Kalisch, M Dogterom bioRxiv, 2021.12. 07.471417, 2021 | | 2021 |
| MS2DeepScore: a novel deep learning similarity measure to compare tandem mass spectra F Huber, S van der Burg, JJJ van der Hooft, L Ridder Journal of cheminformatics 13 (1), 84, 2021 | 78 | 2021 |
| DOME: recommendations for supervised machine learning validation in biology I Walsh, D Fishman, D Garcia-Gasulla, T Titma, G Pollastri, J Harrow, ... Nature methods 18 (10), 1122-1127, 2021 | 155 | 2021 |
| A community resource for paired genomic and metabolomic data mining MA Schorn, S Verhoeven, L Ridder, F Huber, DD Acharya, AA Aksenov, ... Nature Chemical Biology 17 (4), 363-368, 2021 | 105 | 2021 |
| Spec2Vec: Improved mass spectral similarity scoring through learning of structural relationships F Huber, L Ridder, S Verhoeven, JH Spaaks, F Diblen, S Rogers, ... PLoS computational biology 17 (2), e1008724, 2021 | 140 | 2021 |
| Advances in decomposing complex metabolite mixtures using substructure-and network-based computational metabolomics approaches MA Beniddir, KB Kang, G Genta-Jouve, F Huber, S Rogers, ... Natural product reports 38 (11), 1967-1993, 2021 | 103 | 2021 |
Justin J.J. van der HooftAssistant Professor Computational Metabolomics @ WUR在 wur.nl 的电子邮件经过验证
