GPT-4 performance on querying scientific publications: reproducibility, accuracy, and impact of an instruction sheet K Tao, ZA Osman, PL Tzou, SY Rhee, V Ahluwalia, RW Shafer BMC Medical Research Methodology 24 (1), 139, 2024 | 1 | 2024 |
1744. Next generation sequencing (NGS) optimization of Oral Polio Vaccine samples YJ Carrington, F Zhou, P Tzou, M Xiao, S Leary, J Altamirano, ... Open Forum Infectious Diseases 10 (Supplement_2), ofad500. 1575, 2023 | | 2023 |
GPT-4 Performance on Querying Scientific Publications: Reproducibility, Accuracy K Tao, ZA Osman, PL Tzou, SY Rhee, V Ahluwalia, RW Shafer Bioinformatics 39, 11, 2023 | | 2023 |
Human immunodeficiency virus 1 5′-leader mutations in plasma viruses before and after the development of reverse transcriptase inhibitor-resistance mutations J Nouhin, PL Tzou, SY Rhee, MK Sahoo, BA Pinsky, M Krupkin, ... Journal of General Virology 104 (10), 001898, 2023 | | 2023 |
HIV-1 5’-Leader Mutations in Plasma Viruses Before and After the Development of Reverse Transcriptase Inhibitor-Resistance Mutations J Nouhin, PL Tzou, SY Rhee, MK Sahoo, BA Pinsky, M Krupkin, ... medRxiv, 2023 | | 2023 |
HIV-1 group M capsid amino acid variability: Implications for sequence quality control of genotypic resistance testing K Tao, SY Rhee, PL Tzou, ZA Osman, SLK Pond, SP Holmes, RW Shafer Viruses 15 (4), 992, 2023 | 2 | 2023 |
Highly Ambiguous HIV-1 Pol Positions Encoding Multiple Amino Acids Usually Result from Antiviral or Immune Selection Pressure K Tao, SY Rhee, PL Tzou, SP Holmes, RW Shafer AIDS Research and Human Retroviruses 39 (3), 119-123, 2023 | | 2023 |
Sierra SARS-CoV-2 sequence and antiviral resistance analysis program PL Tzou, K Tao, MK Sahoo, SLK Pond, BA Pinsky, RW Shafer Journal of Clinical Virology 157, 105323, 2022 | 5 | 2022 |
Susceptibility of SARS-CoV-2 Omicron variants to therapeutic monoclonal antibodies: systematic review and meta-analysis K Tao, PL Tzou, SL Kosakovsky Pond, JPA Ioannidis, RW Shafer Microbiology spectrum 10 (4), e00926-22, 2022 | 68 | 2022 |
Coronavirus Resistance Database (CoV-RDB): SARS-CoV-2 susceptibility to monoclonal antibodies, convalescent plasma, and plasma from vaccinated persons PL Tzou, K Tao, SLK Pond, RW Shafer Plos one 17 (3), e0261045, 2022 | 82 | 2022 |
Kosakovsky Pond, SL; Ioannidis, JPA; Shafer, RW Susceptibility of SARS-CoV-2 Omicron variants to therapeutic monoclonal antibodies: Systematic review and meta-analysis K Tao, PL Tzou Microbiol Spectr 10 (4), e0092622, 2022 | 47 | 2022 |
SARS-CoV-2 antiviral therapy K Tao, PL Tzou, J Nouhin, H Bonilla, P Jagannathan, RW Shafer Clinical microbiology reviews 34 (4), e00109-21, 2021 | 104 | 2021 |
The biological and clinical significance of emerging SARS-CoV-2 variants K Tao, PL Tzou, J Nouhin, RK Gupta, T de Oliveira, SL Kosakovsky Pond, ... Nature Reviews Genetics 22 (12), 757-773, 2021 | 994 | 2021 |
Temporal trends in HIV-1 mutations used for the surveillance of transmitted drug resistance SY Rhee, PL Tzou, RW Shafer Viruses 13 (5), 879, 2021 | 13 | 2021 |
Recovery of consolidation after sleep following experimental stroke–interaction of slow waves, spindles and GABA J Kim, L Guo, A Hishinuma, S Lemke, DS Ramanathan, SJ Won, ... bioRxiv, 2021.01. 21.427707, 2021 | | 2021 |
Temporal Trends in HIV-1 Mutations Used for the Surveillance of Transmitted Drug Resistance. Viruses 2021, 13, 879 SY Rhee, PL Tzou, RW Shafer s Note: MDPI stays neu-tral with regard to jurisdictional claims in …, 2021 | | 2021 |
Kosakovsky Pond SL, Fera D, Shafer RW K Tao, PL Tzou, J Nouhin, RK Gupta, T de Oliveira The biological and clinical significance of emerging SARS-CoV-2 variants …, 2021 | 68 | 2021 |
Coronavirus antiviral research database (CoV-RDB): an online database designed to facilitate comparisons between candidate anti-coronavirus compounds PL Tzou, K Tao, J Nouhin, SY Rhee, BD Hu, S Pai, N Parkin, RW Shafer Viruses 12 (9), 1006, 2020 | 68 | 2020 |
Expanded spectrum of antiretroviral-selected mutations in human immunodeficiency virus type 2 PL Tzou, D Descamps, SY Rhee, DN Raugi, C Charpentier, N Taveira, ... The Journal of Infectious Diseases 221 (12), 1962-1972, 2020 | 19 | 2020 |
Analysis of unusual and signature APOBEC-mutations in HIV-1 pol next-generation sequences PL Tzou, SL Kosakovsky Pond, S Avila-Rios, SP Holmes, R Kantor, ... PLoS One 15 (2), e0225352, 2020 | 21 | 2020 |