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| Systematic assessment of long-read RNA-seq methods for transcript identification and quantification FJ Pardo-Palacios, D Wang, F Reese, M Diekhans, S Carbonell-Sala, ... Nature methods, 1-15, 2024 | 37 | 2024 |
| 5'Capping protocol to add 5’cap structures to exogenous synthetic RNA references (spike-ins) S Carbonell-Sala, R Guigó | 1 | 2024 |
| CapTrap-Seq cDNA library preparation for full-length RNA sequencing S Carbonell-Sala, R Guigó | 1 | 2024 |
| Expression dynamics of long non-coding RNAs during imaginal disc development and regeneration in Drosophila C Camilleri-Robles, R Amador, M Tiebe, AA Teleman, F Serras, R Guigó, ... bioRxiv, 2024.03. 19.585729, 2024 | | 2024 |
| An Insertion Within SIRPβ1 Shows a Dual Effect Over Alzheimer’s Disease Cognitive Decline Altering the Microglial Response JM García-Alberca, I de Rojas, E Sanchez-Mejias, D Garrido-Martín, ... Journal of Alzheimer's Disease, 1-18, 2024 | | 2024 |
| Studying relative RNA localization From nucleus to the cytosol VF Ntasis, R Guigó bioRxiv, 2024 | | 2024 |
| Integration of transcription regulation and functional genomic data reveals lncRNA SNHG6’s role in hematopoietic differentiation and leukemia JM Hazan, R Amador, T Ali-Nasser, T Lahav, SR Shotan, M Steinberg, ... Journal of Biomedical Science 31 (1), 27, 2024 | | 2024 |
| Molecular signatures of alternative reproductive strategies in a facultatively social hover wasp BA Taylor, D Taylor, A Bodrug‐Schepers, F Câmara Ferreira, ... Molecular Ecology 33 (2), e17217, 2024 | | 2024 |
| An encyclopedia of enhancer-gene regulatory interactions in the human genome AR Gschwind, KS Mualim, A Karbalayghareh, MU Sheth, KK Dey, ... bioRxiv, 2023 | 8 | 2023 |
| The hologenome of Daphnia magna reveals possible DNA methylation and microbiome-mediated evolution of the host genome A Chaturvedi, X Li, V Dhandapani, H Marshall, S Kissane, ... Nucleic Acids Research 51 (18), 9785-9803, 2023 | 4 | 2023 |
| A fast non-parametric test of association for multiple traits D Garrido-Martín, M Calvo, F Reverter, R Guigó Genome Biology 24 (1), 230, 2023 | 3 | 2023 |
| The status of the human gene catalogue P Amaral, S Carbonell-Sala, FM De La Vega, T Faial, A Frankish, ... Nature 622 (7981), 41-47, 2023 | 45 | 2023 |
| Genome annotation: From human genetics to biodiversity genomics R Guigó Cell Genomics 3 (8), 2023 | 5 | 2023 |
| The precision toxicology initiative PrecisionTox Consortium Toxicology letters 383, 33-42, 2023 | 5 | 2023 |
| CapTrap-Seq: A platform-agnostic and quantitative approach for high-fidelity full-length RNA transcript sequencing S Carbonell-Sala, J Lagarde, H Nishiyori, E Palumbo, C Arnan, ... bioRxiv, 2023.06. 16.543444, 2023 | 3 | 2023 |
| The ENCODE4 long-read RNA-seq collection reveals distinct classes of transcript structure diversity F Reese, B Williams, G Balderrama-Gutierrez, D Wyman, MH Çelik, ... bioRxiv, 2023 | 14 | 2023 |
| Putting hornets on the genomic map E Favreau, A Cini, D Taylor, F Câmara Ferreira, MA Bentley, F Cappa, ... Scientific Reports 13 (1), 6232, 2023 | 1 | 2023 |
| Functional evolution of clustered aquaporin genes reveals insights into the oceanic success of teleost eggs A Ferré, F Chauvigné, A Vlasova, B Norberg, L Bargelloni, R Guigó, ... Molecular biology and evolution 40 (4), msad071, 2023 | 6 | 2023 |
| RNAget: an API to securely retrieve RNA quantifications S Upchurch, E Palumbo, J Adams, D Bujold, G Bourque, J Nedzel, ... Bioinformatics 39 (4), btad126, 2023 | 3 | 2023 |
