A comprehensive characterization of novel CYP-BM3 homolog (CYP-BA) from Bacillus aryabhattai S Bhattacharya, AK Nautiyal, R Bhattacharjee, AK Padhi, V Junghare, ... Enzyme and Microbial Technology 148, 109806, 2021 | | 2021 |
A comprehensive protein design protocol to identify resistance mutations and signatures of adaptation in pathogens AK Padhi, T Tripathi Briefings in Functional Genomics 22 (2), 195-203, 2023 | 6 | 2023 |
A distant angiogenin variant causes amyotrophic lateral sclerosis through loss-of-function mechanisms: Insights from long-timescale atomistic simulations and conformational … AK Padhi, R Shukla, P Narain, J Gomes Computers in Biology and Medicine 135, 104602, 2021 | 4 | 2021 |
A molecular dynamics based investigation reveals the role of rare Ribonuclease 4 variants in amyotrophic lateral sclerosis susceptibility AK Padhi, J Gomes Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis 813, 1-12, 2019 | 9 | 2019 |
A molecular dynamics simulation based prediction of delete-rious angiogenin mutations causing amyotrophic lateral scle-rosis AK Padhi, B Jayaram, J Gomes The 18th Conversation, Albany, 2013 | 1 | 2013 |
A variant in human AIOLOS impairs adaptive immunity by interfering with IKAROS M Yamashita, HS Kuehn, K Okuyama, S Okada, Y Inoue, N Mitsuiki, ... Nature immunology 22 (7), 893-903, 2021 | 42 | 2021 |
Accelerating COVID-19 research using molecular dynamics simulation AK Padhi, SL Rath, T Tripathi The Journal of Physical Chemistry B 125 (32), 9078-9091, 2021 | 61 | 2021 |
An integrated computational pipeline for designing high-affinity nanobodies with expanded genetic codes AK Padhi, A Kumar, K Haruna, H Sato, H Tamura, S Nagatoishi, ... Briefings in Bioinformatics 22 (6), bbab338, 2021 | 5 | 2021 |
ANGDelMut–a web-based tool for predicting and analyzing functional loss mechanisms of amyotrophic lateral sclerosis-associated angiogenin mutations AK Padhi, SV Vasaikar, B Jayaram, J Gomes F1000Research 2, 2013 | 7* | 2013 |
Angiogenin mutations in Hungarian patients with amyotrophic lateral sclerosis: Clinical, genetic, computational, and functional analyses K Tripolszki, J Danis, AK Padhi, J Gomes, R Bozó, ZF Nagy, D Nagy, ... Brain and Behavior 9 (6), e01293, 2019 | 11 | 2019 |
Can SARS-CoV-2 accumulate mutations in the S-protein to increase pathogenicity? AK Padhi, T Tripathi ACS Pharmacology & Translational Science 3 (5), 1023-1026, 2020 | 64 | 2020 |
Comprehensive analysis of liquid–liquid phase separation propensities of HSV-1 proteins and their interaction with host factors TT Sushma Subedi, Niharika Nag, Harish Shukla, Aditya K. Padhi Journal of Cellular Biochemistry, 2023 | 1 | 2023 |
Computational and functional characterization of angiogenin mutations, and correlation with amyotrophic lateral sclerosis AK Padhi, K Banerjee, J Gomes, M Banerjee PLoS One 9 (11), e111963, 2014 | 17 | 2014 |
Computational Approaches for Development of Engineered Therapeutics against SARS-CoV-2 A Joshi, T Tripathi, SK Singh, AK Padhi Biochemistry, 2022 | 3 | 2022 |
Computational protein design for COVID-19 research and emerging therapeutics P Kalita, T Tripathi, AK Padhi ACS Central Science 9 (4), 602-613, 2023 | 9 | 2023 |
Delineating the Structure–Dynamics–Binding Differences among BA. 1, BA. 4/5, and BF. 7 SARS-CoV-2 Variants through Atomistic Simulations: Correlation with Structural and … A Joshi, S Maurya, A Mahale, SL Rath, T Tripathi, AK Padhi ACS omega 8 (41), 37852-37863, 2023 | | 2023 |
Design of a peptide-based subunit vaccine against novel coronavirus SARS-CoV-2 P Kalita, AK Padhi, KYJ Zhang, T Tripathi Microbial Pathogenesis 145, 104236, 2020 | 219 | 2020 |
Designing a vaccine for fascioliasis using immunogenic 24 kDa mu-class glutathione s-transferase J Kalita, AK Padhi, T Tripathi Infection, Genetics and Evolution 83, 104352, 2020 | 9 | 2020 |
Designing stable and high affinity therapeutic nanobodies through the incorporation of non-canonical amino acids AK Padhi, K Zhang 助成研究報告集, 303-308, 2022 | | 2022 |
Development of multi-epitope driven subunit vaccine against Fasciola gigantica using immunoinformatics approach P Kalita, DL Lyngdoh, AK Padhi, H Shukla, T Tripathi International journal of biological macromolecules 138, 224-233, 2019 | 71 | 2019 |