Clinical information extraction applications: a literature review Y Wang, L Wang, M Rastegar-Mojarad, S Moon, F Shen, N Afzal, S Liu, ... Journal of biomedical informatics 77, 34-49, 2018 | 780 | 2018 |
A comparison of word embeddings for the biomedical natural language processing Y Wang, S Liu, N Afzal, M Rastegar-Mojarad, L Wang, F Shen, ... Journal of biomedical informatics 87, 12-20, 2018 | 418 | 2018 |
Toward a complete dataset of drug-drug interaction information from publicly available sources S Ayvaz, J Horn, O Hassanzadeh, Q Zhu, J Stan, N Tatonetti, S Vilar, ... Journal of Biomedical Informatics, 2015 | 164 | 2015 |
MedSTS: a resource for clinical semantic textual similarity Y Wang, N Afzal, S Fu, L Wang, F Shen, M Rastegar-Mojarad, H Liu Language Resources and Evaluation 54, 57-72, 2020 | 136 | 2020 |
Opportunities for drug repositioning from phenome-wide association studies M Rastegar-Mojarad, Z Ye, JM Kolesar, SJ Hebbring, SM Lin Nature Biotechnology 33, 2015 | 132 | 2015 |
Toward a Learning Health-care System–Knowledge Delivery at the Point of Care Empowered by Big Data and NLP V Kaggal, R Komandur Elayavilli, S Mehrabi, J Pankratz, S Sohn, Y Wang, ... Biomedical Informatics Insights 8 (Suppl 1), 13, 2016 | 81 | 2016 |
Collecting and Analyzing Patient Experiences of Health Care From Social Media. M Rastegar-Mojarad, Z Ye, D Wall, N Murali, S Lin JMIR research protocols 4 (3), e78-e78, 2015 | 69 | 2015 |
‘RE:fine drugs’: an interactive dashboard to access drug repurposing opportunities S Moosavinasab, J Patterson, R Strouse, M Rastegar-Mojarad, K Regan, ... Database, 2016 | 57 | 2016 |
BELMiner: adapting a rule-based relation extraction system to extract biological expression language statements from bio-medical literature evidence sentences KE Ravikumar, M Rastegar-Mojarad, H Liu Database 2017, baw156, 2017 | 54 | 2017 |
Overview of the BioCreative/OHNLP challenge 2018 task 2: clinical semantic textual similarity Y Wang, N Afzal, S Liu, M Rastegar-Mojarad, L Wang, F Shen, S Fu, H Liu Proceedings of the BioCreative/OHNLP Challenge 2018, 2018 | 44 | 2018 |
Application of Clinical Text Data for Phenome-Wide Association Studies (PheWASs) SJ Hebbring, M Rastegar-Mojarad, Z Ye, J Mayer, C Jacobson, S Lin Bioinformatics, 2015 | 44 | 2015 |
Dependency and AMR embeddings for drug-drug interaction extraction from biomedical literature Y Wang, S Liu, M Rastegar-Mojarad, L Wang, F Shen, F Liu, H Liu Proceedings of the 8th acm international conference on bioinformatics …, 2017 | 43 | 2017 |
A new method for prioritizing drug repositioning candidates extracted by literature-based discovery M Rastegar-Mojarad, RK Elayavilli, D Li, R Prasad, H Liu 2015 IEEE international conference on Bioinformatics and Biomedicine (BIBM …, 2015 | 43 | 2015 |
Detecting signals in noisy data - can ensemble classifiers help identify adverse drug reaction in tweets? M Rastegar-Mojarad, R Komandur Elayavilli, Y Yu, H Liu Proceedings of the social media mining shared task workshop at the Pacific …, 2015 | 39 | 2015 |
Extracting chemical–protein relations using attention-based neural networks S Liu, F Shen, R Komandur Elayavilli, Y Wang, M Rastegar-Mojarad, ... Database 2018, bay102, 2018 | 36 | 2018 |
Assessing unmet information needs of breast cancer survivors: Exploratory study of online health forums using text classification and retrieval S McRoy, M Rastegar-Mojarad, Y Wang, KJ Ruddy, TC Haddad, H Liu JMIR cancer 4 (1), e9050, 2018 | 35 | 2018 |
Using Social Media Data to Identify Potential Candidates for Drug Repurposing: A Feasibility Study M Rastegar-Mojarad, H Liu, P Nambisan JMIR Res Protoc 5, 2016 | 35 | 2016 |
Training corpora for the extraction of causal relationships coded in Biological Expression Language (BEL) J Fluck, S Madan, S Ansari, TA Kodamullil, R Karki, M Rastegar-Mojarad, ... Database (Oxford), 2016 | 33 | 2016 |
Training and evaluation corpora for the extraction of causal relationships encoded in Biological Expression Language (BEL) J Fluck, S Madan, S Ansari, TA Kodamullil, R Karki, M Rastegar-Mojarad, ... Database (Oxford), 2016 | 33 | 2016 |
Rare disease knowledge enrichment through a data-driven approach F Shen, Y Zhao, L Wang, MR Mojarad, Y Wang, S Liu, H Liu BMC medical informatics and decision making 19, 1-11, 2019 | 32 | 2019 |