PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq) R Kofler, RV Pandey, C Schlötterer Bioinformatics 27 (24), 3435-3436, 2011 | 793 | 2011 |
Sequencing pools of individuals—mining genome-wide polymorphism data without big funding C Schlötterer, R Tobler, R Kofler, V Nolte Nature Reviews Genetics 15 (11), 749-763, 2014 | 748 | 2014 |
PoPoolation: a toolbox for population genetic analysis of next generation sequencing data from pooled individuals R Kofler, P Orozco-terWengel, N De Maio, RV Pandey, V Nolte, A Futschik, ... PloS one 6 (1), e15925, 2011 | 602 | 2011 |
SciRoKo: a new tool for whole genome microsatellite search and investigation R Kofler, C Schlötterer, T Lelley Bioinformatics 23 (13), 1683-1685, 2007 | 411 | 2007 |
Genome‐wide patterns of latitudinal differentiation among populations of Drosophila melanogaster from North America DK Fabian, M Kapun, V Nolte, R Kofler, PS Schmidt, C Schlötterer, T Flatt Molecular ecology 21 (19), 4748-4769, 2012 | 274 | 2012 |
Combining experimental evolution with next-generation sequencing: a powerful tool to study adaptation from standing genetic variation C Schlötterer, R Kofler, E Versace, R Tobler, SU Franssen Heredity 114 (5), 431-440, 2015 | 269 | 2015 |
Evolutionary genomics can improve prediction of species’ responses to climate change AM Waldvogel, B Feldmeyer, G Rolshausen, M Exposito-Alonso, ... Evolution Letters 4 (1), 4-18, 2020 | 229 | 2020 |
Genetic redundancy fuels polygenic adaptation in Drosophila N Barghi, R Tobler, V Nolte, AM Jakšić, F Mallard, KA Otte, M Dolezal, ... PLoS biology 17 (2), e3000128, 2019 | 227 | 2019 |
Adaptation of Drosophila to a novel laboratory environment reveals temporally heterogeneous trajectories of selected alleles P Orozco‐Terwengel, M Kapun, V Nolte, R Kofler, T Flatt, C Schlötterer Molecular ecology 21 (20), 4931-4941, 2012 | 216 | 2012 |
Sequencing of Pooled DNA Samples (Pool-Seq) Uncovers Complex Dynamics of Transposable Element Insertions in Drosophila melanogaster R Kofler, AJ Betancourt, C Schlötterer PLoS genetics 8 (1), e1002487, 2012 | 211 | 2012 |
Microsatellites for the genus Cucurbita and an SSR-based genetic linkage map of Cucurbita pepo L. L Gong, G Stift, R Kofler, M Pachner, T Lelley Theoretical and Applied Genetics 117, 37-48, 2008 | 205 | 2008 |
A guide for the design of evolve and resequencing studies R Kofler, C Schlötterer Molecular biology and evolution 31 (2), 474-483, 2014 | 154 | 2014 |
Massive Habitat-Specific Genomic Response in D. melanogaster Populations during Experimental Evolution in Hot and Cold Environments R Tobler, SU Franssen, R Kofler, P Orozco-terWengel, V Nolte, ... Molecular biology and evolution 31 (2), 364-375, 2014 | 148 | 2014 |
Gowinda: unbiased analysis of gene set enrichment for genome-wide association studies R Kofler, C Schlötterer Bioinformatics 28 (15), 2084-2085, 2012 | 145 | 2012 |
A first survey of the rye (Secale cereale) genome composition through BAC end sequencing of the short arm of chromosome 1R J Bartoš, E Paux, R Kofler, M Havránková, D Kopecký, P Suchánková, ... BMC Plant Biology 8, 1-12, 2008 | 137 | 2008 |
Tempo and mode of transposable element activity in Drosophila R Kofler, V Nolte, C Schlötterer PLoS Genetics 11 (7), e1005406, 2015 | 116 | 2015 |
The recent invasion of natural Drosophila simulans populations by the P-element R Kofler, T Hill, V Nolte, AJ Betancourt, C Schlötterer Proceedings of the National Academy of Sciences 112 (21), 6659-6663, 2015 | 113 | 2015 |
Exploring the gonad transcriptome of two extreme male pigs with RNA-seq A Esteve-Codina, R Kofler, N Palmieri, G Bussotti, C Notredame, ... BMC genomics 12, 1-14, 2011 | 107 | 2011 |
PoPoolationTE2: comparative population genomics of transposable elements using Pool-Seq R Kofler, D Gomez-Sanchez, C Schloetterer Molecular Biology and Evolution, 038745, 2016 | 97 | 2016 |
Genome-wide patterns of natural variation reveal strong selective sweeps and ongoing genomic conflict in Drosophila mauritiana V Nolte, RV Pandey, R Kofler, C Schlötterer Genome Research, 2012 | 88 | 2012 |