| FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science H Sichtig, T Minogue, Y Yan, C Stefan, A Hall, L Tallon, L Sadzewicz, ... Nature communications 10 (1), 3313, 2019 | 117 | 2019 |
| Crimean-Congo hemorrhagic fever virus (CCHFV): a silent but widespread threat PA Kuehnert, CP Stefan, CV Badger, KM Ricks Current Tropical Medicine Reports 8, 141-147, 2021 | 47 | 2021 |
| Targeted next-generation sequencing for the detection of ciprofloxacin resistance markers using molecular inversion probes CP Stefan, JW Koehler, TD Minogue Scientific reports 6 (1), 25904, 2016 | 37 | 2016 |
| Activation of an essential calcium signaling pathway in Saccharomyces cerevisiae by Kch1 and Kch2, putative low-affinity potassium transporters CP Stefan, N Zhang, T Sokabe, A Rivetta, CL Slayman, C Montell, ... Eukaryotic cell 12 (2), 204-214, 2013 | 37 | 2013 |
| Next-generation sequencing for biodefense: biothreat detection, forensics, and the clinic TD Minogue, JW Koehler, CP Stefan, TA Conrad Clinical chemistry 65 (3), 383-392, 2019 | 33 | 2019 |
| H+ and Pi Byproducts of Glycosylation Affect Ca2+ Homeostasis and Are Retrieved from the Golgi Complex by Homologs of TMEM165 and XPR1 NA Snyder, CP Stefan, CT Soroudi, A Kim, C Evangelista, ... G3: Genes, Genomes, Genetics 7 (12), 3913-3924, 2017 | 23* | 2017 |
| Comparison of illumina and Oxford nanopore sequencing technologies for pathogen detection from clinical matrices using molecular inversion probes CP Stefan, AT Hall, AS Graham, TD Minogue The Journal of Molecular Diagnostics 24 (4), 395-405, 2022 | 21 | 2022 |
| Kch1 family proteins mediate essential responses to endoplasmic reticulum stresses in the yeasts Saccharomyces cerevisiae and Candida albicans CP Stefan, KW Cunningham Journal of Biological Chemistry 288 (48), 34861-34870, 2013 | 19 | 2013 |
| Rapid antibiotic susceptibility testing from blood culture bottles with species agnostic real-time polymerase chain reaction T Maxson, CD Blancett, AS Graham, CP Stefan, TD Minogue PLoS One 13 (12), e0209042, 2018 | 17 | 2018 |
| The host inflammatory response contributes to disease severity in Crimean-Congo hemorrhagic fever virus infected mice JW Golden, X Zeng, CR Cline, JM Smith, SP Daye, BD Carey, ... PLoS Pathogens 18 (5), e1010485, 2022 | 16 | 2022 |
| Aerosol exposure of cynomolgus macaques to SARS-CoV-2 results in more severe pathology than existing models SL Bixler, CP Stefan, A Jay, F Rossi, KM Ricks, CJ Shoemaker, ... BioRxiv, 2021.04. 27.441510, 2021 | 13 | 2021 |
| FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science. Nat Commun 10: 3313 H Sichtig, T Minogue, Y Yan, C Stefan, A Hall, L Tallon, L Sadzewicz, ... | 13 | 2019 |
| Development of real-time reverse transcriptase qPCR assays for the detection of Punta Toro virus and Pichinde virus CP Stefan, K Chase, S Coyne, DA Kulesh, TD Minogue, JW Koehler Virology Journal 13, 1-6, 2016 | 12 | 2016 |
| Detection of 16S rRNA and KPC genes from complex matrix utilizing a molecular inversion probe assay for next-generation sequencing CP Stefan, AT Hall, TD Minogue Scientific Reports 8 (1), 2028, 2018 | 11 | 2018 |
| Exposure route influences disease severity in the COVID-19 cynomolgus macaque model SL Bixler, CP Stefan, AN Jay, FD Rossi, KM Ricks, CJ Shoemaker, ... Viruses 14 (5), 1013, 2022 | 9 | 2022 |
| Transcriptomic analysis reveals host miRNAs correlated with immune gene dysregulation during fatal disease progression in the Ebola virus cynomolgus macaque disease model CP Stefan, CE Arnold, CJ Shoemaker, EE Zumbrun, LA Altamura, ... Microorganisms 9 (3), 665, 2021 | 6 | 2021 |
| Development of a specific MPXV antigen detection immunodiagnostic assay I Davis, JM Payne, VL Olguin, MP Sanders, T Clements, CP Stefan, ... Frontiers in Microbiology 14, 1243523, 2023 | 4 | 2023 |
| Prophylactic administration of the monoclonal antibody adintrevimab protects against SARS-CoV-2 in hamster and non-human primate models of COVID-19 EE Zumbrun, CI Kaku, L Dillinger, SE Zak, AI Kuehne, RR Bakken, ... Antimicrobial Agents and Chemotherapy 67 (1), e01353-22, 2023 | 4 | 2023 |
| Emerging viral infections DD Colón-López, CP Stefan, JW Koehler Genomic and Precision Medicine, 141-154, 2019 | 4 | 2019 |
| Diagnostic targETEd seQuencing adjudicaTion (DETEQT): algorithms for adjudicating targeted infectious disease next-generation sequencing panels TA Conrad, CC Lo, JW Koehler, AS Graham, CP Stefan, AT Hall, ... The Journal of Molecular Diagnostics 21 (1), 99-110, 2019 | 3 | 2019 |
