A Draft Sequence for the Genome of the Domesticated Silkworm (Bombyx mori) Biology Analysis Group, Q Xia, Z Zhou, C Lu, D Cheng, F Dai, B Li, ... Science 306 (5703), 1937-1940, 2004 | 1394 | 2004 |
The khmer software package: enabling efficient nucleotide sequence analysis MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ... F1000Research 4, 2015 | 368 | 2015 |
A reference-free algorithm for computational normalization of shotgun sequencing data CT Brown, A Howe, Q Zhang, AB Pyrkosz, TH Brom arXiv preprint arXiv:1203.4802, 2012 | 256 | 2012 |
A modular network model of aging H Xue, B Xian, D Dong, K Xia, S Zhu, Z Zhang, L Hou, Q Zhang, Y Zhang, ... Molecular systems biology 3 (1), 147, 2007 | 200 | 2007 |
Identification of the proliferation/differentiation switch in the cellular network of multicellular organisms K Xia, H Xue, D Dong, S Zhu, J Wang, Q Zhang, L Hou, H Chen, R Tao, ... PLoS computational biology 2 (11), e145, 2006 | 113 | 2006 |
These are not the k-mers you are looking for: efficient online k-mer counting using a probabilistic data structure Q Zhang, J Pell, R Canino-Koning, AC Howe, CT Brown PloS one 9 (7), e101271, 2014 | 95 | 2014 |
Microbial community analysis with ribosomal gene fragments from shotgun metagenomes J Guo, JR Cole, Q Zhang, CT Brown, JM Tiedje Applied and Environmental Microbiology 82 (1), 157-166, 2016 | 82 | 2016 |
Genomic versatility and functional variation between two dominant heterotrophic symbionts of deep-sea Osedax worms SK Goffredi, H Yi, Q Zhang, JE Klann, IA Struve, RC Vrijenhoek, CT Brown The ISME Journal 8 (4), 908-924, 2014 | 38 | 2014 |
The khmer software package: enabling efficient nucleotide sequence analysis. F1000Res 4: 900 MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ... | 31 | 2015 |
The khmer software package: enabling efficient sequence analysis M Crusoe, G Edvenson, J Fish, A Howe, E McDonald, J Nahum, ... URL http://dx. doi. org/10.6084/m9. figshare 979190, 2014 | 26 | 2014 |
Crossing the streams: a framework for streaming analysis of short DNA sequencing reads Q Zhang, S Awad, CT Brown PeerJ PrePrints 3, e890v1, 2015 | 19 | 2015 |
A reference-free algorithm for computational normalization of shotgun sequencing data. 2012 CT Brown, A Howe, Q Zhang, AB Pyrkosz, TH Brom arXiv preprint arXiv:1203.4802, 2012 | 12 | 2012 |
Comparative genomic analysis links karyotypic evolution with genomic evolution in the Indian Muntjac (Muntiacus muntjak vaginalis) Q Zhou, L Huang, J Zhang, X Zhao, Q Zhang, F Song, J Chi, F Yang, ... Chromosoma 115, 427-436, 2006 | 11 | 2006 |
A reference-free algorithm for computational normalization of shotgun sequencing data. arXivorg CT Brown, A Howe, Q Zhang, AB Pyrkosz, TH Brom arXiv preprint arXiv:1203.4802, 2012 | 7 | 2012 |
khmer k-mer counting & filtering FTW MR Crusoe, G Edvenson, J Fish, A Howe, L Irber, E McDonald, J Nahum, ... | 6 | 2010 |
Metagenome Assembly and Contig Assignment Q Zhang Microbiome Analysis: Methods and Protocols, 179-192, 2018 | 2 | 2018 |
The khmer software package: enabling efficient sequence analysis. figshare MR Crusoe, G Edvenson, J Fish, A Howe, E McDonald, J Nahum, ... | 2 | 2014 |
Metagenome Assembly and Functional Annotation A Howe, F Yang, Q Zhang Functional Metagenomics: Tools and Applications, 151-159, 2017 | | 2017 |
Novel computational approaches to investigate microbial diversity Q Zhang Michigan State University, 2015 | | 2015 |