An update on the human and animal enteric pathogen Clostridium perfringens R Kiu, LJ Hall Emerging Microbes & Infections 7 (1), 1-15, 2018 | 405 | 2018 |
Microbiota supplementation with Bifidobacterium and Lactobacillus modifies the preterm infant gut microbiota and metabolome: an observational study C Alcon-Giner, MJ Dalby, S Caim, J Ketskemety, A Shaw, K Sim, ... Cell Reports Medicine 1 (5), 2020 | 188 | 2020 |
Probing Genomic Aspects of the Multi-Host Pathogen Clostridium perfringens Reveals Significant Pangenome Diversity, and a Diverse Array of Virulence Factors R Kiu, S Caim, S Alexander, P Pachori, LJ Hall Frontiers in microbiology 8, 2485, 2017 | 93 | 2017 |
Preterm Infant-Associated Clostridium tertium, Clostridium cadaveris, and Clostridium paraputrificum Strains: Genomic and Evolutionary Insights R Kiu, S Caim, C Alcon-Giner, G Belteki, P Clarke, D Pickard, G Dougan, ... Genome Biology and Evolution 9 (10), 2707-2714, 2017 | 50 | 2017 |
Genomic analysis on broiler-associated Clostridium perfringens strains and exploratory caecal microbiome investigation reveals key factors linked to poultry necrotic enteritis R Kiu, J Brown, H Bedwell, C Leclaire, S Caim, D Pickard, G Dougan, ... Animal microbiome 1 (1), 1-14, 2019 | 37 | 2019 |
Maternal gut microbiota Bifidobacterium promotes placental morphogenesis, nutrient transport and fetal growth in mice J Lopez-Tello, Z Schofield, R Kiu, MJ Dalby, D van Sinderen, G Le Gall, ... Cellular and Molecular Life Sciences 79 (7), 1-16, 2022 | 30 | 2022 |
Phylogenomic analysis of gastroenteritis-associated Clostridium perfringens in England and Wales over a 7-year period indicates distribution of clonal toxigenic strains in … R Kiu, S Caim, A Painset, D Pickard, C Swift, G Dougan, AE Mather, ... Microbial Genomics 5 (10), 1-13, 2019 | 30 | 2019 |
Bifidobacterium breve UCC2003 Induces a Distinct Global Transcriptomic Program in Neonatal Murine Intestinal Epithelial Cells R Kiu, A Treveil, LC Harnisch, S Caim, C Leclaire, D van Sinderen, ... iScience 23 (7), 101336, 2020 | 26 | 2020 |
Particular genomic and virulence traits associated with preterm infant-derived toxigenic Clostridium perfringens strains R Kiu, AG Shaw, K Sim, A Acuna-Gonzalez, CA Price, H Bedwell, ... Nature Microbiology 8 (6), 1160-1175, 2023 | 25* | 2023 |
Genomic Analysis of Clostridium perfringens BEC/CPILE-Positive, Toxinotype D and E Strains Isolated from Healthy Children R Kiu, K Sim, A Shaw, E Cornwell, D Pickard, JS Kroll, LJ Hall Toxins 11 (9), 543, 2019 | 15 | 2019 |
Clinical NEC prevention practices drive different microbiome profiles and functional responses in the preterm intestine CJ Neumann, A Mahnert, C Kumpitsch, R Kiu, MJ Dalby, M Kujawska, ... Nature Communications 14 (1), 1349, 2023 | 10* | 2023 |
Enterococcus innesii sp. nov., isolated from the wax moth Galleria mellonella HCC Gooch, R Kiu, S Rudder, DJ Baker, LJ Hall, A Maxwell International journal of systematic and evolutionary microbiology 71 (12 …, 2021 | 10 | 2021 |
A novel bacteriocin produced by Bifidobacterium longum subsp. infantis has dual antimicrobial and immunomodulatory activity SG Javvadi, M Kujawska, D Papp, AM Gontarczyk, A Jordan, ... bioRxiv, 2022 | 5 | 2022 |
BACTspeciesID: identify microbial species and genome contamination using 16S rRNA gene approach R Kiu https://github.com/raymondkiu/bactspeciesID, 2020 | 5 | 2020 |
sequence-stats: generate sequence statistics from FASTA and FASTQ files R Kiu https://github.com/raymondkiu/sequence-stats, 2020 | 4 | 2020 |
Unveiling the pathogenic mechanisms of Clostridium perfringens toxins and virulence factors A Camargo, JD Ramírez, R Kiu, LJ Hall, M Muñoz Emerging Microbes & Infections 13 (1), 2341968, 2024 | 2 | 2024 |
Response: “Commentary: Probing genomic aspects of the multi-host pathogen Clostridium perfringens reveals significant pangenome diversity, and a diverse array of virulence factors” R Kiu, LJ Hall Frontiers in microbiology 9, 1857, 2018 | 2 | 2018 |
fastq-info: compute estimated sequencing depth (coverage) of prokaryotic genomes R Kiu https://github.com/raymondkiu/fastq-info, 2017 | 2* | 2017 |
Profiling the gut and oral microbiota of hormone-receptor positive, HER2-negative metastatic breast cancer patients receiving pembrolizumab and eribulin S Robinson, A Malfettone, M Dalby, R Kiu, D Seki, T Robinson, M Gion, ... | 1 | 2024 |
An efficient method for high molecular weight bacterial DNA extraction suitable for shotgun metagenomics from skin swabs IR Serghiou, D Baker, R Evans, MJ Dalby, R Kiu, E Trampari, S Phillips, ... Microbial Genomics 9 (7), 001058, 2023 | 1 | 2023 |