| Redox balance is key to explaining full vs. partial switching to low-yield metabolism MJA van Hoek, RMH Merks BMC systems biology 6, 1-10, 2012 | 141 | 2012 |
| Emergence of microbial diversity due to cross-feeding interactions in a spatial model of gut microbial metabolism MJA Hoek, RMH Merks BMC systems biology 11, 1-18, 2017 | 109 | 2017 |
| Metabolic adaptation after whole genome duplication MJA van Hoek, P Hogeweg Molecular Biology and Evolution 26 (11), 2441-2453, 2009 | 86 | 2009 |
| In silico evolved lac operons exhibit bistability for artificial inducers, but not for lactose MJA Van Hoek, P Hogeweg Biophysical journal 91 (8), 2833-2843, 2006 | 63 | 2006 |
| The Effect of Stochasticity on the Lac Operon: An Evolutionary Perspective M Van Hoek, P Hogeweg PLoS computational biology 3 (6), e111, 2007 | 56 | 2007 |
| The role of mutational dynamics in genome shrinkage MJA Van Hoek, P Hogeweg Molecular Biology and Evolution 24 (11), 2485-2494, 2007 | 27 | 2007 |
| Major proliferation of transposable elements shaped the genome of the soybean rust pathogen Phakopsora pachyrhizi YK Gupta, FC Marcelino-Guimarães, C Lorrain, A Farmer, S Haridas, ... Nature Communications 14 (1), 1835, 2023 | 12 | 2023 |
| Evolutionary dynamics of metabolic adaptation MJA van Hoek Utrecht University, 2008 | 7 | 2008 |
| The soybean rust pathogen Phakopsora pachyrhizi displays transposable element proliferation that correlates with broad host-range adaptation on legumes YK Gupta, FC Marcelino-Guimarães, C Lorrain, A Farmer, S Haridas, ... bioRxiv, 2022.06. 13.495685, 2022 | 4 | 2022 |
| Protein Cost and Metabolic Network Structure Underlie Different Modes of Metabolic Efficiency MJA van Hoek, RMH Merks | | |
