The khmer software package: enabling efficient nucleotide sequence analysis MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ... F1000Research 4, 2015 | 367 | 2015 |
Bacterial factors that predict relapse after tuberculosis therapy R Colangeli, H Jedrey, S Kim, R Connell, S Ma, UD Chippada Venkata, ... New England Journal of Medicine 379 (9), 823-833, 2018 | 145 | 2018 |
The role of RNA sequence and structure in RNA–protein interactions A Gupta, M Gribskov Journal of molecular biology 409 (4), 574-587, 2011 | 73 | 2011 |
Mycobacterium tuberculosis progresses through two phases of latent infection in humans R Colangeli, A Gupta, SA Vinhas, UD Chippada Venkata, S Kim, C Grady, ... Nature communications 11 (1), 4870, 2020 | 65 | 2020 |
Geographic Differences in the Contribution of ubiA Mutations to High-Level Ethambutol Resistance in Mycobacterium tuberculosis S Lingaraju, L Rigouts, A Gupta, J Lee, AN Umubyeyi, AL Davidow, ... Antimicrobial agents and chemotherapy 60 (7), 4101-4105, 2016 | 40 | 2016 |
Strong Selection Significantly Increases Epistatic Interactions in the Long-Term Evolution of a Protein A Gupta, C Adami PLoS Genetics, 2016 | 40 | 2016 |
Synergistic lethality of a binary inhibitor of Mycobacterium tuberculosis KasA P Kumar, GC Capodagli, D Awasthi, R Shrestha, K Maharaja, P Sukheja, ... MBio 9 (6), 10.1128/mbio. 02101-17, 2018 | 38 | 2018 |
The khmer software package: enabling efficient nucleotide sequence analysis. F1000Res 4: 900 MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ... | 31 | 2015 |
Evolution of Genome Size in Asexual Digital Organisms A Gupta, T LaBar, M Miyagi, C Adami Scientific Reports 6, 2016 | 18 | 2016 |
Differentially-Expressed Pseudogenes in HIV-1 Infection A Gupta, CT Brown, YH Zheng, C Adami Viruses 7 (10), 5191-5205, 2015 | 17 | 2015 |
Reversible gene silencing through frameshift indels and frameshift scars provide adaptive plasticity for Mycobacterium tuberculosis A Gupta, D Alland Nature communications 12 (1), 4702, 2021 | 16 | 2021 |
Pattern matching in RNA structures K Li, R Rahman, A Gupta, P Siddavatam, M Gribskov Bioinformatics Research and Applications: Fourth International Symposium …, 2008 | 16 | 2008 |
Identifying complete RNA structural ensembles including pseudoknots A Gupta, R Rahman, K Li, M Gribskov RNA biology 9 (2), 187-199, 2012 | 13 | 2012 |
The khmer software package: enabling efficient nucleotide sequence analysis. F1000Research 4, 900 MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ... | 11 | 2015 |
SNPTB: nucleotide variant identification and annotation in Mycobacterium tuberculosis genomes A Gupta bioRxiv, doi:10.1101/227066, 2017 | 4 | 2017 |
41P gender based variations in presentation and management of lung cancer at a South Asian tertiary referral centre V Vashistha, C Choudhari, A Garg, A Gupta, G Parthasarathy, C Mohan, ... Journal of Thoracic Oncology 13 (4), S23, 2018 | 1 | 2018 |
Shared Information between Residues Is Sufficient to Detect Pairwise Epistasis in a Protein A Gupta, C Adami PLoS Genetics 12 (12), e1006471, 2016 | 1 | 2016 |
G488 Pulse oximetry is an unreliable measure of haemoglobin oxygen saturation as calculated by earlobe blood gas co-oximetry in ambulatory paediatric sickle cell disease patients S Zheng, F Chan, G Ruiz, D Rees, A Gupta Archives of Disease in Childhood 101 (Suppl 1), A289-A290, 2016 | 1 | 2016 |
RNA-protein interactions: Analysis of binding interfaces and prediction of protein binding sites in RNA A Gupta Purdue University, 2011 | 1 | 2011 |
WHOLE-EXOME SEQUENCING AMONG A COHORT OF PRIMARY CNS VASCULITIS FOR THE IDENTIFICATION OF GENETIC VASCULOPATHIES J Sharma, MVP Srivastava, A Garg, MC Sharma, R Bhatia, MB Singh, ... INTERNATIONAL JOURNAL OF STROKE 18 (3), 115-115, 2023 | | 2023 |