Interaction of human telomeric DNA with N- methyl mesoporphyrin IX JM Nicoludis, SP Barrett, JL Mergny, LA Yatsunyk Nucleic acids research 40 (12), 5432-5447, 2012 | 229 | 2012 |
Optimized End-Stacking Provides Specificity of N-Methyl Mesoporphyrin IX for Human Telomeric G-Quadruplex DNA JM Nicoludis, ST Miller, PD Jeffrey, SP Barrett, PR Rablen, TJ Lawton, ... Journal of the American Chemical Society 134 (50), 20446-20456, 2012 | 201 | 2012 |
Rudimentary G-quadruplex–based telomere capping in Saccharomyces cerevisiae JS Smith, Q Chen, LA Yatsunyk, JM Nicoludis, MS Garcia, R Kranaster, ... Nature structural & molecular biology 18 (4), 478-485, 2011 | 161 | 2011 |
Induction of G-quadruplex DNA structure by Zn (II) 5, 10, 15, 20-tetrakis (N-methyl-4-pyridyl) porphyrin AJ Bhattacharjee, K Ahluwalia, S Taylor, O Jin, JM Nicoludis, R Buscaglia, ... Biochimie 93 (8), 1297-1309, 2011 | 103 | 2011 |
N‐methylmesoporphyrin IX fluorescence as a reporter of strand orientation in guanine quadruplexes NC Sabharwal, V Savikhin, JR Turek‐Herman, JM Nicoludis, VA Szalai, ... The FEBS journal 281 (7), 1726-1737, 2014 | 101 | 2014 |
Structure and sequence analyses of clustered protocadherins reveal antiparallel interactions that mediate homophilic specificity JM Nicoludis, SY Lau, CPI Schärfe, DS Marks, WA Weihofen, R Gaudet Structure 23 (11), 2087-2098, 2015 | 78 | 2015 |
Antiparallel protocadherin homodimers use distinct affinity-and specificity-mediating regions in cadherin repeats 1-4 JM Nicoludis, BE Vogt, AG Green, CPI Schärfe, DS Marks, R Gaudet Elife 5, e18449, 2016 | 59 | 2016 |
Structures in multiple conformations reveal distinct transition metal and proton pathways in an Nramp transporter AT Bozzi, CM Zimanyi, JM Nicoludis, BK Lee, CH Zhang, R Gaudet Elife 8, e41124, 2019 | 55 | 2019 |
Applications of sequence coevolution in membrane protein biochemistry JM Nicoludis, R Gaudet Biochimica et Biophysica Acta (BBA)-Biomembranes 1860 (4), 895-908, 2017 | 37 | 2017 |
Investigation of the interactions between Pt(II) and Pd(II) derivatives of 5,10,15,20-tetrakis (N-methyl-4-pyridyl) porphyrin and G-quadruplex DNA NC Sabharwal, O Mendoza, JM Nicoludis, T Ruan, JL Mergny, ... JBIC Journal of Biological Inorganic Chemistry 21, 227-239, 2016 | 32 | 2016 |
Interaction specificity of clustered protocadherins inferred from sequence covariation and structural analysis JM Nicoludis, AG Green, S Walujkar, EJ May, M Sotomayor, DS Marks, ... Proceedings of the National Academy of Sciences 116 (36), 17825-17830, 2019 | 31 | 2019 |
Transient water wires mediate selective proton transport in designed channel proteins HT Kratochvil, LC Watkins, M Mravic, JL Thomaston, JM Nicoludis, ... Nature chemistry 15 (7), 1012-1021, 2023 | 18 | 2023 |
Structural basis of antibody inhibition and chemokine activation of the human CC chemokine receptor 8 D Sun, Y Sun, E Janezic, T Zhou, M Johnson, C Azumaya, S Noreng, ... Nature Communications 14 (1), 7940, 2023 | 7 | 2023 |
Crystal structure of a three-tetrad, parallel, K+-stabilized human telomeric G-quadruplex at 1.35 Å resolution EV Chen, JM Nicoludis, BM Powell, KS Li, LA Yatsunyk Acta Crystallographica Section F: Structural Biology Communications 79 (6), 2023 | 2 | 2023 |
Transient water wires mediate selective proton conduction in designed channel proteins HT Kratochvil, LC Watkins, WF DeGrado bioRxiv, 2022 | 2 | 2022 |
Scalable approaches for generating, validating and incorporating data from high-throughput functional assays to improve clinical variant classification SR Padigepati, DA Stafford, CA Tan, MR Silvis, K Jamieson, A Keyser, ... Human Genetics, 1-10, 2024 | | 2024 |
P244: Developing Bayesian graphical models to provide continuous, probabilistic variant interpretation T Manders, Y Kobayashi, J Nicoludis, A Numpally, F Facio, B Johnson, ... Genetics in Medicine Open 1 (1), 100272, 2023 | | 2023 |
A Probabilistic Graphical Modeling Approach to Variant Interpretation That Improves VUS Resolution and Increases Actionability of Genetic Testing by Providing Continuous … R Nussbaum, T Manders, J Nicoludis, A Nampally, K Nykamp, ... JOURNAL OF MOLECULAR DIAGNOSTICS 24 (10), S19-S20, 2022 | | 2022 |
Developing large-scale molecular stability engines for clinical variant interpretation JM Nicoludis, GF Ptacek, J Morin-Leisk, A Colavin, CL Araya Biophysical Journal 121 (3), 325a, 2022 | | 2022 |
Roles of Hydrogen-Bonding Networks in Proton Channel Function as Revealed through de novo Designed Proton Channels HT Kratochvil, JM Nicoludis, WF DeGrado Biophysical Journal 118 (3), 483a, 2020 | | 2020 |