| The CHEMDNER corpus of chemicals and drugs and its annotation principles M Krallinger, O Rabal, F Leitner, M Vazquez, D Salgado, Z Lu, R Leaman, ... Journal of cheminformatics 7 (S1), 1-17, 2015 | 354 | 2015 |
| RRW: repeated random walks on genome-scale protein networks for local cluster discovery K Macropol, T Can, AK Singh BMC bioinformatics 10 (1), 283, 2009 | 227 | 2009 |
| Introduction to Bioinformatics T Can miRNomics: MicroRNA Biology and Computational Analysis, 51-71, 2014 | 110 | 2014 |
| Estrogen-induced upregulation and 3′-UTR shortening of CDC6 BH Akman, T Can, AE Erson-Bensan Nucleic acids research 40 (21), 10679-10688, 2012 | 105 | 2012 |
| Efficient molecular surface generation using level-set methods T Can, CI Chen, YF Wang Journal of Molecular Graphics and Modelling 25 (4), 442-454, 2006 | 103 | 2006 |
| CTSS: a robust and efficient method for protein structure alignment based on local geometrical and biological features T Can, YF Wang Computational systems bioinformatics. CSB2003. Proceedings of the 2003 IEEE …, 2003 | 91 | 2003 |
| Analysis of protein-protein interaction networks using random walks T Can, O Çamoǧlu, AK Singh Proceedings of the 5th international workshop on Bioinformatics, 61-68, 2005 | 89 | 2005 |
| 3′ UTR shortening and EGF signaling: implications for breast cancer HB Akman, M Oyken, T Tuncer, T Can, AE Erson-Bensan Human molecular genetics 24 (24), 6910-6920, 2015 | 66 | 2015 |
| Alternative polyadenylation: another foe in cancer AE Erson-Bensan, T Can Molecular Cancer Research 14 (6), 507-517, 2016 | 59 | 2016 |
| FPV: fast protein visualization using Java 3D™ T Can, Y Wang, YF Wang, J Su Bioinformatics 19 (8), 913-922, 2003 | 44 | 2003 |
| Decision tree based information integration for automated protein classification O Çamoğlu, T Can, AK Singh, YF Wang Journal of Bioinformatics and Computational Biology 3 (03), 717-742, 2005 | 36 | 2005 |
| Discovering functional interaction patterns in protein-protein interaction networks ME Turanalp, T Can BMC bioinformatics 9 (1), 276, 2008 | 28 | 2008 |
| ProGreSS: Simultaneous searching of protein databases by sequence and structure A Bhattacharya, T Can, T Kahveci, A Singh, YF Wang Pacific symposium on biocomputing 9, 264-275, 2004 | 28 | 2004 |
| Targeting HIF1-alpha/miR-326/ITGA5 axis potentiates chemotherapy response in triple-negative breast cancer R Assidicky, UM Tokat, IO Tarman, O Saatci, PG Ersan, U Raza, H Ogul, ... Breast Cancer Research and Treatment 193 (2), 331-348, 2022 | 26 | 2022 |
| Integrating multi-attribute similarity networks for robust representation of the protein space O Çamoğlu, T Can, AK Singh Bioinformatics 22 (13), 1585-1592, 2006 | 26 | 2006 |
| Reconstruction of the temporal signaling network in Salmonella-infected human cells G Budak, O Eren Ozsoy, Y Aydin Son, T Can, N Tuncbag Frontiers in Microbiology 6, 730, 2015 | 22 | 2015 |
| Automated protein classification using consensus decision T Can, O Camoglu, AK Singh, YF Wang Computational Systems Bioinformatics Conference, 2004. CSB 2004. Proceedings …, 2004 | 21 | 2004 |
| Alternative Polyadenylation Patterns for Novel Gene Discovery and Classification in Cancer O Begik, M Oyken, TC Alican, T Can, AE Erson-Bensan Neoplasia 19 (7), 574-582, 2017 | 18 | 2017 |
| Large-Scale Signaling Network Reconstruction S Hashemikhabir, ES Ayaz, Y Kavurucu, T Can, T Kahveci IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB) 9 …, 2012 | 18 | 2012 |
| Using network context as a filter for miRNA target prediction M Sualp, T Can Biosystems 105 (3), 201-209, 2011 | 18 | 2011 |
