Message passing interface (mpi) B Barker Workshop: high performance computing on stampede 262, 2015 | 209 | 2015 |
Yeast 5 – an expanded reconstruction of the Saccharomyces cerevisiae metabolic network BD Heavner, K Smallbone, B Barker, P Mendes, LP Walker BMC systems biology 6, 1-13, 2012 | 183 | 2012 |
Dynamic epistasis for different alleles of the same gene L Xu, B Barker, Z Gu Proceedings of the National Academy of Sciences 109 (26), 10420-10425, 2012 | 33 | 2012 |
Detection of heterozygous mutations in the genome of mismatch repair defective diploid yeast using a Bayesian approach S Zanders, X Ma, A RoyChoudhury, RD Hernandez, A Demogines, ... Genetics 186 (2), 493-503, 2010 | 28 | 2010 |
A robust and efficient method for estimating enzyme complex abundance and metabolic flux from expression data BE Barker, N Sadagopan, Y Wang, K Smallbone, CR Myers, H Xi, ... Computational biology and chemistry 59, 98-112, 2015 | 26 | 2015 |
Computational approaches for understanding energy metabolism AA Shestov, B Barker, Z Gu, JW Locasale Wiley Interdisciplinary Reviews: Systems Biology and Medicine 5 (6), 733-750, 2013 | 14 | 2013 |
Red Cloud and Aristotle: campus clouds and federations R Knepper, S Mehringer, A Brazier, B Barker, R Reynolds Proceedings of the Humans in the Loop: Enabling and Facilitating Research on …, 2019 | 11 | 2019 |
Predicted metabolic function of the gut microbiota of Drosophila melanogaster NYD Ankrah, BE Barker, J Song, C Wu, JG McMullen, AE Douglas Msystems 6 (3), 10.1128/msystems. 01369-20, 2021 | 10 | 2021 |
Reproducible and portable workflows for scientific computing and HPC in the cloud P Vaillancourt, B Wineholt, B Barker, P Deliyannis, J Zheng, A Suresh, ... Practice and Experience in Advanced Research Computing, 311-320, 2020 | 10 | 2020 |
Dynamic Epistasis under Varying Environmental Perturbations B Barker, L Xu, Z Gu PLOS One 10, e0114911, 2015 | 10 | 2015 |
Self-scaling clusters and reproducible containers to enable scientific computing PZ Vaillancourt, JE Coulter, R Knepper, B Barker 2020 IEEE High Performance Extreme Computing Conference (HPEC), 1-8, 2020 | 7 | 2020 |
Using Containers to Create More Interactive Online Training and Education Materials S Mehringer, B Barker Practice and Experience in Advanced Research Computing, 246-251, 2020 | 2 | 2020 |
Reproducible and Portable Workflows for Scientific Computing and HPC in the Cloud MVM MPI, P Vaillancourt, B Wineholt, B Barker, P Deliyannis, J Zheng, ... | | 2020 |
Advances In Genome-Scale Modeling Applied To Expression-Based Flux Estimation And Epistasis Prediction B Barker | | 2014 |
Genomic analysis of gene regulation complexity B Barker, J Lund BMC Bioinformatics 9 (7), P4, 2008 | | 2008 |