The Phyre2 web portal for protein modeling, prediction and analysis LA Kelley, S Mezulis, CM Yates, MN Wass, MJE Sternberg Nature protocols 10 (6), 845-858, 2015 | 10226 | 2015 |
Protein structure prediction on the Web: a case study using the Phyre server LA Kelley, MJE Sternberg Nature protocols 4 (3), 363-371, 2009 | 5211 | 2009 |
Enhanced genome annotation using structural profiles in the program 3D-PSSM LA Kelley, RM MacCallum, MJE Sternberg Journal of molecular biology 299 (2), 501-522, 2000 | 1878 | 2000 |
3DLigandSite: predicting ligand-binding sites using similar structures MN Wass, LA Kelley, MJE Sternberg Nucleic acids research 38 (suppl_2), W469-W473, 2010 | 781 | 2010 |
Enhancement of protein modeling by human intervention in applying the automatic programs 3D‐JIGSAW and 3D‐PSSM PA Bates, LA Kelley, RM MacCallum, MJE Sternberg Proteins: Structure, Function, and Bioinformatics 45 (S5), 39-46, 2001 | 738 | 2001 |
An automated approach for clustering an ensemble of NMR-derived protein structures into conformationally related subfamilies LA Kelley, SP Gardner, MJ Sutcliffe Protein Engineering, Design and Selection 9 (11), 1063-1065, 1996 | 578 | 1996 |
Exploring the extremes of sequence/structure space with ensemble fold recognition in the program Phyre RM Bennett‐Lovsey, AD Herbert, MJE Sternberg, LA Kelley Proteins: Structure, Function, and Bioinformatics 70 (3), 611-625, 2008 | 541 | 2008 |
ePlant: visualizing and exploring multiple levels of data for hypothesis generation in plant biology J Waese, J Fan, A Pasha, H Yu, G Fucile, R Shi, M Cumming, LA Kelley, ... The Plant Cell 29 (8), 1806-1821, 2017 | 351 | 2017 |
SuSPect: enhanced prediction of single amino acid variant (SAV) phenotype using network features CM Yates, I Filippis, LA Kelley, MJE Sternberg Journal of molecular biology 426 (14), 2692-2701, 2014 | 251 | 2014 |
CAFASP‐1: Critical assessment of fully automated structure prediction methods D Fischer, C Barret, K Bryson, A Elofsson, A Godzik, D Jones, KJ Karplus, ... Proteins: Structure, Function, and Bioinformatics 37 (S3), 209-217, 1999 | 228 | 1999 |
Progress in protein structure prediction: assessment of CASP3 MJE Sternberg, PA Bates, LA Kelley, RM MacCallum Current Opinion in Structural Biology 9 (3), 368-373, 1999 | 166 | 1999 |
Protein folding requires crowd control in a simulated cell BR Jefferys, LA Kelley, MJE Sternberg Journal of molecular biology 397 (5), 1329-1338, 2010 | 122 | 2010 |
Predicting the sub-cellular location of proteins from text using support vector machines BJ Stapley, LA Kelley, MJE Sternberg Biocomputing 2002, 374-385, 2001 | 122 | 2001 |
SAWTED: structure assignment with text description—enhanced detection of remote homologues with automated SWISS-PROT annotation comparisons RM MacCallum, LA Kelley, MJE Sternberg Bioinformatics 16 (2), 125-129, 2000 | 76 | 2000 |
Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains TE Lewis, I Sillitoe, A Andreeva, TL Blundell, DWA Buchan, C Chothia, ... Nucleic acids research 41 (D1), D499-D507, 2012 | 71 | 2012 |
An automated approach for defining core atoms and domains in an ensemble of NMR-derived protein structures. LA Kelley, SP Gardner, MJ Sutcliffe Protein engineering 10 (6), 737-741, 1997 | 69 | 1997 |
High–quality protein backbone reconstruction from alpha carbons using Gaussian mixture models BL Moore, LA Kelley, J Barber, JW Murray, JT MacDonald Journal of computational chemistry 34 (22), 1881-1889, 2013 | 64 | 2013 |
OLDERADO: On‐line database of ensemble representatives and domains LA Kelley, MJ Sutcliffe Protein science 6 (12), 2628-2630, 1997 | 63 | 1997 |
Recognition of remote protein homologies using three-dimensional information to generate a position specific scoring matrix in the program 3D-PSSM LA Kelley, RM MacCallum, MJE Sternberg Proceedings of the third annual international conference on Computational …, 1999 | 60 | 1999 |
Functional significance of mutations in the Snf2 domain of ATRX M Mitson, LA Kelley, MJE Sternberg, DR Higgs, RJ Gibbons Human molecular genetics 20 (13), 2603-2610, 2011 | 59 | 2011 |