Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications GK Savova, JJ Masanz, PV Ogren, J Zheng, S Sohn, KC Kipper-Schuler, ... Journal of the American Medical Informatics Association 17 (5), 507-513, 2010 | 2225 | 2010 |
Extracting information from textual documents in the electronic health record: a review of recent research SM Meystre, GK Savova, KC Kipper-Schuler, JF Hurdle Yearbook of medical informatics 17 (01), 128-144, 2008 | 1104 | 2008 |
PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability JC Kirby, P Speltz, LV Rasmussen, M Basford, O Gottesman, PL Peissig, ... Journal of the American Medical Informatics Association 23 (6), 1046-1052, 2016 | 360 | 2016 |
Overcoming barriers to NLP for clinical text: the role of shared tasks and the need for additional creative solutions WW Chapman, PM Nadkarni, L Hirschman, LW D'avolio, GK Savova, ... Journal of the American Medical Informatics Association 18 (5), 540-543, 2011 | 342 | 2011 |
Overview of the ShARe/CLEF eHealth evaluation lab 2013 H Suominen, S Salanterä, S Velupillai, WW Chapman, G Savova, ... Information Access Evaluation. Multilinguality, Multimodality, and …, 2013 | 311 | 2013 |
Clinical natural language processing in languages other than English: opportunities and challenges A Névéol, H Dalianis, S Velupillai, G Savova, P Zweigenbaum Journal of biomedical semantics 9, 1-13, 2018 | 296 | 2018 |
Development of phenotype algorithms using electronic medical records and incorporating natural language processing KP Liao, T Cai, GK Savova, SN Murphy, EW Karlson, ... bmj 350, 2015 | 288 | 2015 |
Semeval-2016 task 12: Clinical tempeval S Bethard, G Savova, WT Chen, L Derczynski, J Pustejovsky, M Verhagen Proceedings of the 10th international workshop on semantic evaluation …, 2016 | 278 | 2016 |
Normalization of plasma 25-hydroxy vitamin D is associated with reduced risk of surgery in Crohn’s disease AN Ananthakrishnan, A Cagan, VS Gainer, T Cai, SC Cheng, G Savova, ... Inflammatory bowel diseases 19 (9), 1921-1927, 2013 | 275 | 2013 |
Building a robust, scalable and standards-driven infrastructure for secondary use of EHR data: the SHARPn project S Rea, J Pathak, G Savova, TA Oniki, L Westberg, CE Beebe, C Tao, ... Journal of biomedical informatics 45 (4), 763-771, 2012 | 258 | 2012 |
Automatically extracting cancer disease characteristics from pathology reports into a Disease Knowledge Representation Model A Coden, G Savova, I Sominsky, M Tanenblatt, J Masanz, K Schuler, ... Journal of biomedical informatics 42 (5), 937-949, 2009 | 214 | 2009 |
Temporal annotation in the clinical domain WF Styler IV, S Bethard, S Finan, M Palmer, S Pradhan, PC De Groen, ... Transactions of the association for computational linguistics 2, 143-154, 2014 | 210 | 2014 |
The emerging role of electronic medical records in pharmacogenomics RA Wilke, H Xu, JC Denny, DM Roden, RM Krauss, CA McCarty, ... Clinical Pharmacology & Therapeutics 89 (3), 379-386, 2011 | 204 | 2011 |
Semeval-2014 task 7: Analysis of clinical text S Pradhan, N Elhadad, W Chapman, S Manandhar, G Savova Proceedings of the 8th international workshop on semantic evaluation …, 2014 | 201 | 2014 |
Semeval-2015 task 6: Clinical tempeval S Bethard, L Derczynski, G Savova, J Pustejovsky, M Verhagen proceedings of the 9th International Workshop on Semantic Evaluation …, 2015 | 199 | 2015 |
Improving case definition of Crohn's disease and ulcerative colitis in electronic medical records using natural language processing: a novel informatics approach AN Ananthakrishnan, T Cai, G Savova, SC Cheng, P Chen, RG Perez, ... Inflammatory bowel diseases 19 (7), 1411-1420, 2013 | 178 | 2013 |
Using natural language processing to improve efficiency of manual chart abstraction in research: the case of breast cancer recurrence DS Carrell, S Halgrim, DT Tran, DSM Buist, J Chubak, WW Chapman, ... American journal of epidemiology 179 (6), 749-758, 2014 | 170 | 2014 |
Evaluating the state of the art in disorder recognition and normalization of the clinical narrative S Pradhan, N Elhadad, BR South, D Martinez, L Christensen, A Vogel, ... Journal of the American Medical Informatics Association 22 (1), 143-154, 2015 | 165 | 2015 |
Towards comprehensive syntactic and semantic annotations of the clinical narrative D Albright, A Lanfranchi, A Fredriksen, WF Styler IV, C Warner, JD Hwang, ... Journal of the American Medical Informatics Association 20 (5), 922-930, 2013 | 163 | 2013 |
Leveraging informatics for genetic studies: use of the electronic medical record to enable a genome-wide association study of peripheral arterial disease IJ Kullo, J Fan, J Pathak, GK Savova, Z Ali, CG Chute Journal of the American Medical Informatics Association 17 (5), 568-574, 2010 | 153 | 2010 |