Solving the problem of comparing whole bacterial genomes across different sequencing platforms RS Kaas, P Leekitcharoenphon, FM Aarestrup, O Lund PloS one 9 (8), e104984, 2014 | 766 | 2014 |
Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage RS Hendriksen, P Munk, P Njage, B Van Bunnik, L McNally, ... Nature communications 10 (1), 1124, 2019 | 734 | 2019 |
Multiplex PCR for detection of plasmid-mediated colistin resistance determinants, mcr-1, mcr-2, mcr-3, mcr-4 and mcr-5 for surveillance purposes AR Rebelo, V Bortolaia, JS Kjeldgaard, SK Pedersen, ... Eurosurveillance 23 (6), 17-00672, 2018 | 598 | 2018 |
The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium C Kröger, SC Dillon, ADS Cameron, K Papenfort, SK Sivasankaran, ... Proceedings of the National Academy of Sciences 109 (20), E1277-E1286, 2012 | 467 | 2012 |
Detection of mcr-1 encoding plasmid-mediated colistin-resistant Escherichia coli isolates from human bloodstream infection and imported chicken meat, Denmark 2015 H Hasman, AM Hammerum, F Hansen, RS Hendriksen, B Olesen, ... Eurosurveillance 20 (49), 30085, 2015 | 458 | 2015 |
Evaluation of whole genome sequencing for outbreak detection of Salmonella enterica P Leekitcharoenphon, EM Nielsen, RS Kaas, O Lund, FM Aarestrup PloS one 9 (2), e87991, 2014 | 275 | 2014 |
Emergence of a Clonal Lineage of Multidrug-Resistant ESBL-Producing Salmonella Infantis Transmitted from Broilers and Broiler Meat to Humans in Italy between … A Franco, P Leekitcharoenphon, F Feltrin, P Alba, G Cordaro, M Iurescia, ... PloS one 10 (12), e0144802, 2015 | 196 | 2015 |
Global genomic epidemiology of Salmonella enterica serovar Typhimurium DT104 P Leekitcharoenphon, RS Hendriksen, S Le Hello, FX Weill, ... Applied and environmental microbiology 82 (8), 2516-2526, 2016 | 132 | 2016 |
Genomic variation in Salmonella enterica core genes for epidemiological typing P Leekitcharoenphon, O Lukjancenko, C Friis, FM Aarestrup, DW Ussery BMC genomics 13, 1-12, 2012 | 118 | 2012 |
Molecular epidemiology of Salmonella Infantis in Europe: insights into the success of the bacterial host and its parasitic pESI-like megaplasmid P Alba, P Leekitcharoenphon, V Carfora, R Amoruso, G Cordaro, ... Microbial genomics 6 (5), e000365, 2020 | 108 | 2020 |
snpTree-a web-server to identify and construct SNP trees from whole genome sequence data P Leekitcharoenphon, RS Kaas, MCF Thomsen, C Friis, S Rasmussen, ... BMC genomics 13, 1-8, 2012 | 100 | 2012 |
Is the Evolution of Salmonella enterica subsp. enterica Linked to Restriction-Modification Systems? L Roer, RS Hendriksen, P Leekitcharoenphon, O Lukjancenko, RS Kaas, ... Msystems 1 (3), 10.1128/msystems. 00009-16, 2016 | 96 | 2016 |
Genomic signature of multidrug-resistant Salmonella enterica serovar Typhi isolates related to a massive outbreak in Zambia between 2010 and 2012 RS Hendriksen, P Leekitcharoenphon, O Lukjancenko, ... Journal of clinical microbiology 53 (1), 262-272, 2015 | 96 | 2015 |
Characterization and Genetic Variation of Vibrio cholerae Isolated from Clinical and Environmental Sources in Thailand A Siriphap, P Leekitcharoenphon, RS Kaas, C Theethakaew, ... PLoS One 12 (1), e0169324, 2017 | 88 | 2017 |
Occurrence and Characterization of mcr-1-Positive Escherichia coli Isolated From Food-Producing Animals in Poland, 2011–2016 M Zajac, P Sztromwasser, V Bortolaia, P Leekitcharoenphon, LM Cavaco, ... Frontiers in microbiology 10, 1753, 2019 | 86 | 2019 |
Molecular Epidemiology of mcr-Encoded Colistin Resistance in Enterobacteriaceae From Food-Producing Animals in Italy Revealed Through the EU Harmonized … P Alba, P Leekitcharoenphon, A Franco, F Feltrin, A Ianzano, A Caprioli, ... Frontiers in microbiology 9, 1217, 2018 | 83 | 2018 |
Population genetic structure of Listeria monocytogenes strains as determined by pulsed-field gel electrophoresis and multilocus sequence typing C Henri, B Félix, L Guillier, P Leekitcharoenphon, D Michelon, JF Mariet, ... Applied and Environmental Microbiology 82 (18), 5720-5728, 2016 | 82 | 2016 |
An Assessment of Different Genomic Approaches for Inferring Phylogeny of Listeria monocytogenes C Henri, P Leekitcharoenphon, HA Carleton, N Radomski, RS Kaas, ... Frontiers in microbiology 8, 2351, 2017 | 62 | 2017 |
Colistin Resistance Mediated by mcr-1 in ESBL-Producing, Multidrug Resistant Salmonella Infantis in Broiler Chicken Industry, Italy (2016–2017) V Carfora, P Alba, P Leekitcharoenphon, D Ballarò, G Cordaro, ... Frontiers in Microbiology 9, 1880, 2018 | 55 | 2018 |
Application of Whole‐Genome Sequences and Machine Learning in Source Attribution of Salmonella Typhimurium N Munck, PMK Njage, P Leekitcharoenphon, E Litrup, T Hald Risk Analysis 40 (9), 1693-1705, 2020 | 54 | 2020 |