An atlas of alternative splicing profiles and functional associations reveals new regulatory programs and genes that simultaneously express multiple major isoforms J Tapial, KCH Ha, T Sterne-Weiler, A Gohr, U Braunschweig, ... Genome research 27 (10), 1759-1768, 2017 | 363 | 2017 |
Germ-line DNA copy number variation frequencies in a large North American population G Zogopoulos, KCH Ha, F Naqib, S Moore, H Kim, A Montpetit, ... Human genetics 122, 345-353, 2007 | 163 | 2007 |
Multilayered control of alternative splicing regulatory networks by transcription factors H Han, U Braunschweig, T Gonatopoulos-Pournatzis, RJ Weatheritt, ... Molecular cell 65 (3), 539-553. e7, 2017 | 161 | 2017 |
QAPA: a new method for the systematic analysis of alternative polyadenylation from RNA-seq data KCH Ha, BJ Blencowe, Q Morris Genome biology 19, 1-18, 2018 | 159 | 2018 |
RNA sequencing reveals the role of splicing polymorphisms in regulating human gene expression E Lalonde, KCH Ha, Z Wang, A Bemmo, CL Kleinman, T Kwan, ... Genome research 21 (4), 545-554, 2011 | 156 | 2011 |
Efficient and accurate quantitative profiling of alternative splicing patterns of any complexity on a laptop T Sterne-Weiler, RJ Weatheritt, AJ Best, KCH Ha, BJ Blencowe Molecular cell 72 (1), 187-200. e6, 2018 | 154 | 2018 |
Unexpected allelic heterogeneity and spectrum of mutations in Fowler syndrome revealed by next‐generation exome sequencing E Lalonde, S Albrecht, KCH Ha, K Jacob, N Bolduc, C Polychronakos, ... Human mutation 31 (8), 918-923, 2010 | 152 | 2010 |
Oncogenic activation of the RNA binding protein NELFE and MYC signaling in hepatocellular carcinoma H Dang, A Takai, M Forgues, Y Pomyen, H Mou, W Xue, D Ray, KCH Ha, ... Cancer cell 32 (1), 101-114. e8, 2017 | 133 | 2017 |
ARHGDIA: a novel gene implicated in nephrotic syndrome IR Gupta, C Baldwin, D Auguste, KCH Ha, J El Andalousi, S Fahiminiya, ... Journal of medical genetics 50 (5), 330-338, 2013 | 116 | 2013 |
Genetic interaction mapping and exon-resolution functional genomics with a hybrid Cas9–Cas12a platform T Gonatopoulos-Pournatzis, M Aregger, KR Brown, S Farhangmehr, ... Nature biotechnology 38 (5), 638-648, 2020 | 114 | 2020 |
Comparative genomics of elastin: Sequence analysis of a highly repetitive protein D He, M Chung, E Chan, T Alleyne, KCH Ha, M Miao, RJ Stahl, ... Matrix Biology 26 (7), 524-540, 2007 | 77 | 2007 |
RNAcompete methodology and application to determine sequence preferences of unconventional RNA-binding proteins D Ray, KCH Ha, K Nie, H Zheng, TR Hughes, QD Morris Methods 118, 3-15, 2017 | 72 | 2017 |
Mutations in SCARF2 are responsible for Van Den Ende-Gupta syndrome N Anastasio, T Ben-Omran, A Teebi, KCH Ha, E Lalonde, R Ali, ... The American Journal of Human Genetics 87 (4), 553-559, 2010 | 71 | 2010 |
MECP2 is post-transcriptionally regulated during human neurodevelopment by combinatorial action of RNA-binding proteins and miRNAs DC Rodrigues, DS Kim, G Yang, K Zaslavsky, KCH Ha, RSF Mok, ... Cell reports 17 (3), 720-734, 2016 | 68 | 2016 |
The RNA-binding protein SERBP1 functions as a novel oncogenic factor in glioblastoma by bridging cancer metabolism and epigenetic regulation A Kosti, PR De Araujo, WQ Li, GDA Guardia, J Chiou, C Yi, D Ray, ... Genome biology 21, 1-32, 2020 | 67 | 2020 |
Shifts in ribosome engagement impact key gene sets in neurodevelopment and ubiquitination in Rett syndrome DC Rodrigues, M Mufteev, RJ Weatheritt, U Djuric, KCH Ha, PJ Ross, ... Cell reports 30 (12), 4179-4196. e11, 2020 | 55 | 2020 |
Combined malonic and methylmalonic aciduria: exome sequencing reveals mutations in the ACSF3 gene in patients with a non-classic phenotype A Alfares, LD Nunez, K Al-Thihli, J Mitchell, S Melançon, N Anastasio, ... Journal of medical genetics 48 (9), 602-605, 2011 | 52 | 2011 |
Novel Mutations in SCO1 as a Cause of Fatal Infantile Encephalopathy and Lactic Acidosis SC Leary, H Antonicka, F Sasarman, W Weraarpachai, PA Cobine, M Pan, ... Human Mutation 34 (10), 1366-1370, 2013 | 45 | 2013 |
RNAcompete-S: Combined RNA sequence/structure preferences for RNA binding proteins derived from a single-step in vitro selection KB Cook, S Vembu, KCH Ha, H Zheng, KU Laverty, TR Hughes, D Ray, ... Methods 126, 18-28, 2017 | 44 | 2017 |
Identification of gene fusion transcripts by transcriptome sequencing in BRCA1-mutated breast cancers and cell lines KCH Ha, E Lalonde, L Li, L Cavallone, R Natrajan, MB Lambros, ... BMC medical genomics 4, 1-13, 2011 | 40 | 2011 |