| Flux-based transport enhancement as a plausible unifying mechanism for auxin transport in meristem development S Stoma, M Lucas, J Chopard, M Schaedel, J Traas, C Godin PLoS computational biology 4 (10), e1000207, 2008 | 209 | 2008 |
| Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities S Cohen-Boulakia, K Belhajjame, O Collin, J Chopard, C Froidevaux, ... Future Generation Computer Systems, 2017 | 165 | 2017 |
| PlantGL: a Python-based geometric library for 3D plant modelling at different scales C Pradal, F Boudon, C Nouguier, J Chopard, C Godin Graphical models 71 (1), 1-21, 2009 | 156 | 2009 |
| A Computational Framework for 3D Mechanical Modeling of Plant Morphogenesis with Cellular Resolution F Boudon, J Chopard, O Ali, B Gilles, O Hamant, A Boudaoud, J Traas, ... PLoS computational biology 11 (1), e1003950, 2015 | 142 | 2015 |
| Integration of hormonal signaling networks and mobile microRNAs is required for vascular patterning in Arabidopsis roots D Muraro, N Mellor, MP Pound, M Lucas, J Chopard, HM Byrne, C Godin, ... Proceedings of the National Academy of Sciences 111 (2), 857-862, 2014 | 111 | 2014 |
| Auxin carriers localization drives auxin accumulation in plant cells infected by Frankia in Casuarina glauca actinorhizal nodules F Perrine-Walker, P Doumas, M Lucas, V Vaissayre, NJ Beauchemin, ... Plant physiology 154 (3), 1372-1380, 2010 | 91 | 2010 |
| A data-driven integrative model of sepal primordium polarity in Arabidopsis C La Rota, J Chopard, P Das, S Paindavoine, F Rozier, E Farcot, C Godin, ... The Plant cell 23 (12), 4318-4333, 2011 | 45 | 2011 |
| Modelling foliage characteristics in 3D tree crowns: influence on light interception and leaf irradiance CE Parveaud, J Chopard, J Dauzat, B Courbaud, D Auclair Trees 22 (1), 87-104, 2008 | 41 | 2008 |
| InfraPhenoGrid: A scientific workflow infrastructure for Plant Phenomics on the Grid C Pradal, S Artzet, J Chopard, D Dupuis, C Fournier, M Mielewczik, ... Future Generation Computer Systems 67, 341-353, 2017 | 37 | 2017 |
| Spatio‐temporal water dynamics in mature Banksia menziesii trees during drought MKF Bader, W Ehrenberger, R Bitter, J Stevens, BP Miller, J Chopard, ... Physiologia plantarum 152 (2), 301-315, 2014 | 29 | 2014 |
| A multi-scale model of the interplay between cell signalling and hormone transport in specifying the root meristem of Arabidopsis thaliana D Muraro, A Larrieu, M Lucas, J Chopard, H Byrne, C Godin, J King Journal of theoretical biology 404, 182-205, 2016 | 19 | 2016 |
| Using mechanics in the modelling of meristem morphogenesis S Stoma, J Chopard, C Godin, J Traas 5th International Workshop on Functional-Structural Plant Models 52, 1-4, 2007 | 11 | 2007 |
| A general spatially-explicit model to inform rapid response to new biological invasions: why do we need one and what should it look like M Renton, D Savage, J Chopard, F Chan, D Marinova, RS Anderssen MODSIM2011, 19th International Congress on Modelling and Simulation …, 2011 | 9 | 2011 |
| Towards a formal expression of morphogenesis: a mechanics based integration of cell growth at tissue scale J Chopard, C Godin, J Traas Proceedings of the 7th International Workshop on Information Processing in …, 2007 | 6 | 2007 |
| OpenAlea: An open-source platform for the integration of heterogeneous FSPM components S Dufour-Kowalski, C Pradal, N Dones, PB De Reuille, F Boudon, ... FSPM07-5th International Workshop on Functional-Structural Plant Models, P36 …, 2007 | 6 | 2007 |
| 3D modelling of water transfers in soil and roots systems J Chopard Proc. 4th Int. Workshop on Functional-Structural Plant Models, 7-11, 2004 | 5 | 2004 |
| Fostering Collaborations towards Integrative Research Development N Brouwers, S Moore, T Lyons, G Hardy, J Chopard, G Matusick, ... Forests 4 (2), 329-342, 2013 | 3 | 2013 |
| Phenomenal: a software framework for model-assisted analysis of high throughput plant phenotyping data C Fournier, S Artzet, J Chopard, M Mielewczik, N Brichet, L Cabrera, ... IAMPS 2015 (International Workshop on Image Analysis Methods for the Plant …, 2015 | 2 | 2015 |
| Impact of a tree’s hydraulic strategy on its survival in a global climate change context J Chopard, M Bader, EJ Veneklaas, M Renton MODSIM2011, 19th International Congress on Modelling and Simulation. MSSANZ …, 2011 | 2 | 2011 |
| Genetic variability in light-related parameters of maize models revealed by linking 3D-reconstruction of plant architecture with light model and phenotyping platform TW Chen, C Fournier, S Artzet, N Brichet, J Chopard, C Pradal, SA Prado, ... 2016 IEEE International Conference on Functional-Structural Plant Growth …, 2016 | 1 | 2016 |
