| Brief report: The lincRNA Hotair is required for epithelial-to-mesenchymal transition and stemness maintenance of cancer cell lines C Pádua Alves, AS Fonseca, BR Muys, R Barros e Lima Bueno, ... Stem cells 31 (12), 2827-2832, 2013 | 249 | 2013 |
| Random X inactivation and extensive mosaicism in human placenta revealed by analysis of allele-specific gene expression along the X chromosome JC Moreira de Mello, ÉSS Araújo, R Stabellini, AM Fraga, JES Souza, ... PloS one 5 (6), e10947, 2010 | 153 | 2010 |
| Bioinformatics construction of the human cell surfaceome JPC Da Cunha, PAF Galante, JE De Souza, RF De Souza, PM Carvalho, ... Proceedings of the National Academy of Sciences 106 (39), 16752-16757, 2009 | 146 | 2009 |
| Sense-antisense pairs in mammals: functional and evolutionary considerations PAF Galante, DO Vidal, JE de Souza, AA Camargo, SJ de Souza Genome biology 8, 1-14, 2007 | 77 | 2007 |
| ExInt: an exon intron database M Sakharkar, F Passetti, JE de Souza, M Long, SJ de Souza Nucleic acids research 30 (1), 191-194, 2002 | 69 | 2002 |
| Genome-wide identification of cancer/testis genes and their association with prognosis in a pan-cancer analysis VL da Silva, AF Fonseca, M Fonseca, TE da Silva, AC Coelho, JE Kroll, ... Oncotarget 8 (54), 92966, 2017 | 61 | 2017 |
| Expression analysis of stem cell-related genes reveal OCT4 as a predictor of poor clinical outcome in medulloblastoma CO Rodini, DE Suzuki, N Saba-Silva, A Cappellano, JES de Souza, ... Journal of neuro-oncology 106, 71-79, 2012 | 54 | 2012 |
| A genetic network that suppresses genome rearrangements in Saccharomyces cerevisiae and contains defects in cancers CD Putnam, A Srivatsan, RV Nene, SL Martinez, SP Clotfelter, SN Bell, ... Nature communications 7 (1), 11256, 2016 | 42 | 2016 |
| The impact of SNPs on the interpretation of SAGE and MPSS experimental data APM Silva, JES De Souza, PAF Galante, GJ Riggins, SJ De Souza, ... Nucleic acids research 32 (20), 6104-6110, 2004 | 42 | 2004 |
| Whole Genome Sequencing of the Pirarucu (Arapaima gigas) Supports Independent Emergence of Major Teleost Clades RA Vialle, JES de Souza, KP Lopes, DG Teixeira, PA Alves Sobrinho, ... Genome biology and evolution 10 (9), 2366-2379, 2018 | 40 | 2018 |
| Altered expression of immune-related genes in children with Down syndrome BL Zampieri, JM Biselli-Perico, JES de Souza, MC Bürger, ... PLoS One 9 (9), e107218, 2014 | 39 | 2014 |
| A portrait of germline mutation in Brazilian at-risk for hereditary breast cancer AR de Souza Timoteo, AÉMM Gonçalves, LAP Sales, BM Albuquerque, ... Breast cancer research and treatment 172, 637-646, 2018 | 34 | 2018 |
| Mitochondrial genome instability in colorectal adenoma and adenocarcinoma LF de Araujo, AS Fonseca, BR Muys, JR Plaça, RBL Bueno, JCC Lorenzi, ... Tumor Biology 36, 8869-8879, 2015 | 34 | 2015 |
| A genomic case study of desmoplastic small round cell tumor: comprehensive analysis reveals insights into potential therapeutic targets and development of a monitoring tool for … EN Ferreira, BDF Barros, JE De Souza, RV Almeida, GT Torrezan, ... Human Genomics 10, 1-13, 2016 | 33 | 2016 |
| A small interfering RNA (siRNA) database for SARS-CoV-2 IG Medeiros, AS Khayat, B Stransky, S Santos, P Assumpção, ... Scientific reports 11 (1), 8849, 2021 | 30 | 2021 |
| A decision tree to improve identification of pathogenic mutations in clinical practice PM do Nascimento, IG Medeiros, RM Falcão, B Stransky, JES de Souza BMC medical informatics and decision making 20, 1-11, 2020 | 29 | 2020 |
| ORESTES are enriched in rare exon usage variants affecting the encoded proteins NJ Sakabe, JES de Souza, PAF Galante, PSL de Oliveira, F Passetti, ... Comptes rendus. Biologies 326 (10-11), 979-985, 2003 | 28 | 2003 |
| Complex landscape of germline variants in Brazilian patients with hereditary and early onset breast cancer GT Torrezan, FGSR de Almeida, MCP Figueiredo, BDDF Barros, ... Frontiers in genetics 9, 161, 2018 | 23 | 2018 |
| Distinct patterns of somatic alterations in a lymphoblastoid and a tumor genome derived from the same individual PAF Galante, RB Parmigiani, Q Zhao, OL Caballero, JE De Souza, ... Nucleic acids research 39 (14), 6056-6068, 2011 | 23 | 2011 |
| Differential expression of inflammation‐related genes in children with Down syndrome CRS Silva, JM Biselli-Périco, BL Zampieri, WA Silva Jr, JES de Souza, ... Mediators of Inflammation 2016 (1), 6985903, 2016 | 21 | 2016 |
