| Commensal-driven immune zonation of the liver promotes host defence A Gola, MG Dorrington, E Speranza, C Sala, RM Shih, AJ Radtke, ... Nature 589 (7840), 131-136, 2021 | 181 | 2021 |
| Single-cell RNA sequencing reveals SARS-CoV-2 infection dynamics in lungs of African green monkeys E Speranza, BN Williamson, F Feldmann, GL Sturdevant, L Pérez-Pérez, ... Science translational medicine 13 (578), eabe8146, 2021 | 157 | 2021 |
| Transcriptomic signatures differentiate survival from fatal outcomes in humans infected with Ebola virus X Liu, E Speranza, C Muñoz-Fontela, S Haldenby, NY Rickett, ... Genome biology 18, 1-17, 2017 | 148 | 2017 |
| IBEX: A versatile multiplex optical imaging approach for deep phenotyping and spatial analysis of cells in complex tissues AJ Radtke, E Kandov, B Lowekamp, E Speranza, CJ Chu, A Gola, ... Proceedings of the National Academy of Sciences 117 (52), 33455-33465, 2020 | 125 | 2020 |
| IBEX: an iterative immunolabeling and chemical bleaching method for high-content imaging of diverse tissues AJ Radtke, CJ Chu, Z Yaniv, L Yao, J Marr, RT Beuschel, H Ichise, A Gola, ... Nature protocols 17 (2), 378-401, 2022 | 57 | 2022 |
| Comparison of transcriptomic platforms for analysis of whole blood from Ebola-infected cynomolgus macaques E Speranza, LA Altamura, K Kulcsar, SL Bixler, CA Rossi, RJ Schoepp, ... Scientific Reports 7 (1), 14756, 2017 | 40 | 2017 |
| T-cell receptor diversity and the control of T-cell homeostasis mark Ebola virus disease survival in humans E Speranza, P Ruibal, JR Port, F Feng, L Burkhardt, A Grundhoff, ... The Journal of infectious diseases 218 (suppl_5), S508-S518, 2018 | 31 | 2018 |
| RNA-Seq identifies SPGs as a ventral skeletal patterning cue in sea urchins ML Piacentino, DT Zuch, J Fishman, S Rose, EE Speranza, C Li, J Yu, ... Development 143 (4), 703-714, 2016 | 31 | 2016 |
| A conserved transcriptional response to intranasal Ebola virus exposure in nonhuman primates prior to onset of fever E Speranza, SL Bixler, LA Altamura, CE Arnold, WD Pratt, ... Science translational medicine 10 (434), eaaq1016, 2018 | 30 | 2018 |
| Host transcriptional response to Ebola virus infection E Speranza, JH Connor Vaccines 5 (3), 30, 2017 | 27 | 2017 |
| Neuronal maturation reduces the type I IFN response to orthobunyavirus infection and leads to increased apoptosis of human neurons CW Winkler, TA Woods, BR Groveman, AB Carmody, EE Speranza, ... Journal of Neuroinflammation 16, 1-16, 2019 | 26 | 2019 |
| Comparative transcriptomics in Ebola Makona-infected ferrets, nonhuman primates, and humans RW Cross, E Speranza, V Borisevich, SG Widen, TG Wood, RS Shim, ... The Journal of infectious diseases 218 (suppl_5), S486-S495, 2018 | 26 | 2018 |
| The developmental transcriptome for Lytechinus variegatus exhibits temporally punctuated gene expression changes JD Hogan, JL Keenan, L Luo, J Ibn-Salem, A Lamba, D Schatzberg, ... Developmental biology 460 (2), 139-154, 2020 | 22 | 2020 |
| Age-related differences in immune dynamics during SARS-CoV-2 infection in rhesus macaques E Speranza, JN Purushotham, JR Port, B Schwarz, M Flagg, ... Life science alliance 5 (4), 2022 | 21 | 2022 |
| A multi-scale, multiomic atlas of human normal and follicular lymphoma lymph nodes AJ Radtke, E Postovalova, A Varlamova, A Bagaev, M Sorokina, ... BioRxiv, 2022.06. 03.494716, 2022 | 14 | 2022 |
| SARS-CoV-2 infection dynamics in lungs of African green monkeys E Speranza, BN Williamson, F Feldmann, GL Sturdevant, L Pérez-Pérez, ... bioRxiv, 2020 | 14 | 2020 |
| Factors associated with progression to death in patients with Lassa fever in Nigeria: an observational study J Strampe, DA Asogun, E Speranza, M Pahlmann, A Soucy, S Bockholt, ... The Lancet Infectious Diseases 21 (6), 876-886, 2021 | 10 | 2021 |
| Single-cell RNA sequencing reveals SARS-CoV-2 infection dynamics in lungs of African green monkeys. Sci Transl Med 13: eabe8146 E Speranza, BN Williamson, F Feldmann, GL Sturdevant, L Pérez-Pérez, ... | 10 | 2021 |
| Understanding virus–host interactions in tissues E Speranza Nature Microbiology 8 (8), 1397-1407, 2023 | 8 | 2023 |
| Virology—the path forward AL Rasmussen, GK Gronvall, AC Lowen, F Goodrum, J Alwine, ... Journal of virology 98 (1), e01791-23, 2024 | 6 | 2024 |
