The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration B Smith, M Ashburner, C Rosse, J Bard, W Bug, W Ceusters, LJ Goldberg, ... Nature biotechnology 25 (11), 1251-1255, 2007 | 3031 | 2007 |
Conserved cell types with divergent features in human versus mouse cortex RD Hodge, TE Bakken, JA Miller, KA Smith, ER Barkan, LT Graybuck, ... Nature 573 (7772), 61-68, 2019 | 1432 | 2019 |
A sequence homology and bioinformatic approach can predict candidate targets for immune responses to SARS-CoV-2 A Grifoni, J Sidney, Y Zhang, RH Scheuermann, B Peters, A Sette Cell host & microbe 27 (4), 671-680. e2, 2020 | 1038 | 2020 |
ViPR: an open bioinformatics database and analysis resource for virology research BE Pickett, EL Sadat, Y Zhang, JM Noronha, RB Squires, V Hunt, M Liu, ... Nucleic acids research 40 (D1), D593-D598, 2012 | 732 | 2012 |
SARS-CoV-2 infection of the oral cavity and saliva N Huang, P Pérez, T Kato, Y Mikami, K Okuda, RC Gilmore, CD Conde, ... Nature medicine 27 (5), 892-903, 2021 | 726 | 2021 |
Critical assessment of automated flow cytometry data analysis techniques N Aghaeepour, G Finak, FlowCAP Consortium, Dream Consortium, ... Nature methods 10 (3), 228-238, 2013 | 671 | 2013 |
Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project CF Taylor, D Field, SA Sansone, J Aerts, R Apweiler, M Ashburner, ... Nature biotechnology 26 (8), 889-896, 2008 | 616 | 2008 |
Impact of SARS-CoV-2 variants on the total CD4+ and CD8+ T cell reactivity in infected or vaccinated individuals A Tarke, J Sidney, N Methot, ED Yu, Y Zhang, JM Dan, B Goodwin, ... Cell Reports Medicine 2 (7), 2021 | 545 | 2021 |
A RESTful API for access to phylogenetic tools via the CIPRES science gateway MA Miller, T Schwartz, BE Pickett, S He, EB Klem, RH Scheuermann, ... Evolutionary Bioinformatics 11, EBO. S21501, 2015 | 496 | 2015 |
Single-nucleus and single-cell transcriptomes compared in matched cortical cell types TE Bakken, RD Hodge, JA Miller, Z Yao, TN Nguyen, B Aevermann, ... PloS one 13 (12), e0209648, 2018 | 473 | 2018 |
MIFlowCyt: the minimum information about a Flow Cytometry Experiment JA Lee, J Spidlen, K Boyce, J Cai, N Crosbie, M Dalphin, J Furlong, ... Cytometry Part A: the journal of the International Society for Analytical …, 2008 | 470 | 2008 |
UmuD mutagenesis protein of Escherichia coli: overproduction, purification, and cleavage by RecA. SE Burckhardt, R Woodgate, RH Scheuermann, H Echols Proceedings of the National Academy of Sciences 85 (6), 1811-1815, 1988 | 434 | 1988 |
Using single nuclei for RNA-seq to capture the transcriptome of postmortem neurons SR Krishnaswami, RV Grindberg, M Novotny, P Venepally, B Lacar, ... Nature protocols 11 (3), 499-524, 2016 | 424 | 2016 |
Comparative cellular analysis of motor cortex in human, marmoset and mouse TE Bakken, NL Jorstad, Q Hu, BB Lake, W Tian, BE Kalmbach, M Crow, ... Nature 598 (7879), 111-119, 2021 | 415 | 2021 |
CD19 antigen in leukemia and lymphoma diagnosis and immunotherapy RH Scheuermann, E Racila Leukemia & lymphoma 18 (5-6), 385-397, 1995 | 408 | 1995 |
Pre-existing immunity against swine-origin H1N1 influenza viruses in the general human population JA Greenbaum, MF Kotturi, Y Kim, C Oseroff, K Vaughan, N Salimi, R Vita, ... Proceedings of the National Academy of Sciences 106 (48), 20365-20370, 2009 | 396 | 2009 |
The ontology for biomedical investigations A Bandrowski, R Brinkman, M Brochhausen, MH Brush, B Bug, ... PloS one 11 (4), e0154556, 2016 | 376 | 2016 |
Toward an ontological treatment of disease and diagnosis RH Scheuermann, W Ceusters, B Smith Summit on translational bioinformatics 2009, 116, 2009 | 355 | 2009 |
Influenza research database: an integrated bioinformatics resource for influenza research and surveillance RB Squires, J Noronha, V Hunt, A García‐Sastre, C Macken, ... Influenza and other respiratory viruses 6 (6), 404-416, 2012 | 348 | 2012 |
Introducing the bacterial and viral bioinformatics resource center (BV-BRC): a resource combining PATRIC, IRD and ViPR RD Olson, R Assaf, T Brettin, N Conrad, C Cucinell, JJ Davis, ... Nucleic acids research 51 (D1), D678-D689, 2023 | 343 | 2023 |