A global view of pleiotropy and phenotypically derived gene function in yeast AM Dudley, DM Janse, A Tanay, R Shamir, GMD Church Molecular systems biology 1 (1), 2005.0001, 2005 | 385 | 2005 |
Measuring absolute expression with microarrays with a calibrated reference sample and an extended signal intensity range AM Dudley, J Aach, MA Steffen, GM Church Proceedings of the National Academy of Sciences 99 (11), 7554-7559, 2002 | 314 | 2002 |
The Spt components of SAGA facilitate TBP binding to a promoter at a post-activator-binding step in vivo AM Dudley, C Rougeulle, F Winston Genes & development 13 (22), 2940-2945, 1999 | 253 | 1999 |
Learning a prior on regulatory potential from eQTL data SI Lee, AM Dudley, D Drubin, PA Silver, NJ Krogan, D Pe'er, D Koller PLoS genetics 5 (1), e1000358, 2009 | 227 | 2009 |
Surface plasmon resonance biosensor for rapid label-free detection of microribonucleic acid at subfemtomole level H Sipova, S Zhang, AM Dudley, D Galas, K Wang, J Homola Analytical chemistry 82 (24), 10110-10115, 2010 | 222 | 2010 |
Identifying regulatory mechanisms using individual variation reveals key role for chromatin modification SI Lee, D Pe'er, AM Dudley, GM Church, D Koller Proceedings of the National Academy of Sciences 103 (38), 14062-14067, 2006 | 161 | 2006 |
Genomic Sequence Diversity and Population Structure of Saccharomyces cerevisiae Assessed by RAD-seq GA Cromie, KE Hyma, CL Ludlow, C Garmendia-Torres, TL Gilbert, P May, ... G3: Genes, Genomes, Genetics 3 (12), 2163-2171, 2013 | 153 | 2013 |
Parasexual Ploidy Reduction Drives Population Heterogeneity Through Random and Transient Aneuploidy in Candida albicans MA Hickman, C Paulson, A Dudley, J Berman Genetics 200 (3), 781-794, 2015 | 119 | 2015 |
Evaluation of methods for detection of fluorescence labeled subcellular objects in microscope images P Ruusuvuori, T Äijö, S Chowdhury, C Garmendia-Torres, J Selinummi, ... BMC bioinformatics 11, 1-17, 2010 | 111 | 2010 |
Systems genetics JH Nadeau, AM Dudley Science 331 (6020), 1015-1016, 2011 | 99 | 2011 |
Independent origins of yeast associated with coffee and cacao fermentation CL Ludlow, GA Cromie, C Garmendia-Torres, A Sirr, M Hays, C Field, ... Current Biology 26 (7), 965-971, 2016 | 86 | 2016 |
Aneuploidy underlies a multicellular phenotypic switch Z Tan, M Hays, GA Cromie, EW Jeffery, AC Scott, V Ahyong, A Sirr, ... Proceedings of the National Academy of Sciences 110 (30), 12367-12372, 2013 | 86 | 2013 |
Rapid Phenotypic and Genotypic Diversification After Exposure to the Oral Host Niche in Candida albicans A Forche, G Cromie, AC Gerstein, NV Solis, T Pisithkul, W Srifa, E Jeffery, ... Genetics 209 (3), 725-741, 2018 | 83 | 2018 |
Model-driven analysis of experimentally determined growth phenotypes for 465 yeast gene deletion mutants under 16 different conditions ES Snitkin, AM Dudley, DM Janse, K Wong, GM Church, D Segrè Genome biology 9, 1-18, 2008 | 75 | 2008 |
A polyploid admixed origin of beer yeasts derived from European and Asian wine populations JC Fay, P Liu, GT Ong, MJ Dunham, GA Cromie, EW Jeffery, CL Ludlow, ... PLoS Biology 17 (3), e3000147, 2019 | 71 | 2019 |
Specific components of the SAGA complex are required for Gcn4-and Gcr1-mediated activation of the his4-912δ promoter in Saccharomyces cerevisiae AM Dudley, LJ Gansheroff, F Winston Genetics 151 (4), 1365-1378, 1999 | 46 | 1999 |
Selection of Candida albicans trisomy during oropharyngeal infection results in a commensal-like phenotype A Forche, NV Solis, M Swidergall, R Thomas, A Guyer, A Beach, ... PLoS genetics 15 (5), e1008137, 2019 | 45 | 2019 |
T7 RNA polymerase-dependent expression of COXII in yeast mitochondria JL Pinkham, AM Dudley, TL Mason Molecular and cellular biology 14 (7), 4643-4652, 1994 | 45 | 1994 |
Identification and Analysis of Mot3, a Zinc Finger Protein That Binds to the Retrotransposon Ty Long Terminal Repeat (δ) in Saccharomyces cerevisiae JM Madison, AM Dudley, F Winston Molecular and cellular biology 18 (4), 1879-1890, 1998 | 41 | 1998 |
Predicting phenotype from patterns of annotation OD King, JC Lee, AM Dudley, DM Janse, GM Church, FP Roth Bioinformatics 19 (suppl_1), i183-i189, 2003 | 36 | 2003 |