Maximum allowed solvent accessibilites of residues in proteins MZ Tien, AG Meyer, DK Sydykova, SJ Spielman, CO Wilke PloS one 8 (11), e80635, 2013 | 434 | 2013 |
PeptideBuilder: A simple Python library to generate model peptides MZ Tien, DK Sydykova, AG Meyer, CO Wilke PeerJ 1, e80, 2013 | 80 | 2013 |
The E. coli molecular phenotype under different growth conditions MU Caglar, JR Houser, CS Barnhart, DR Boutz, SM Carroll, A Dasgupta, ... Scientific reports 7 (1), 45303, 2017 | 56 | 2017 |
Predicting evolutionary site variability from structure in viral proteins: buriedness, packing, flexibility, and design A Shahmoradi, DK Sydykova, SJ Spielman, EL Jackson, ET Dawson, ... Journal of molecular evolution 79, 130-142, 2014 | 53 | 2014 |
Controlled Measurement and Comparative Analysis of Cellular Components in E. coli Reveals Broad Regulatory Changes in Response to Glucose Starvation JR Houser, C Barnhart, DR Boutz, SM Carroll, A Dasgupta, JK Michener, ... PLoS computational biology 11 (8), e1004400, 2015 | 48 | 2015 |
Measuring evolutionary rates of proteins in a structural context DK Sydykova, BR Jack, SJ Spielman, CO Wilke F1000Research 6, 2017 | 24 | 2017 |
Calculating site-specific evolutionary rates at the amino-acid or codon level yields similar rate estimates DK Sydykova, CO Wilke PeerJ 5, e3391, 2017 | 15 | 2017 |
PeptideBuilder: A simple Python library to generate model peptides. PeerJ. 2013; 1: e80 MZ Tien, DK Sydykova, AG Meyer, CO Wilke | 7 | |
Moderate amounts of epistasis are not evolutionarily stable in small populations DK Sydykova, T LaBar, C Adami, CO Wilke Journal of Molecular Evolution 88, 435-444, 2020 | 5 | 2020 |
Theory of measurement for site-specific evolutionary rates in amino-acid sequences DK Sydykova, CO Wilke BioRxiv, 411025, 2018 | 2 | 2018 |
Behavior and limitations of molecular and population-level models of evolution D Sydykova The University of Texas at Austin, 2019 | | 2019 |
Critical level of epistasis separates trajectories toward evolution of mutational or drift robustness in small populations C Adami, D Sydykova, T Labar, C Wilke APS March Meeting Abstracts 2019, L70. 342, 2019 | | 2019 |
TheE. colimolecular phenotype under different growth conditions MU Caglar, JR Houser, CS Barnhart, DR Boutz, SM Carroll, A Dasgupta, ... | | 2016 |
context [version 2; peer review: 4 approved] DK Sydykova, BR Jack, SJ Spielman, CO Wilke context [version 2; peer review: 4 approved] 1000, 2018, 1845 | | 1845 |
Please let us know how this document benefits you. MU Caglar, JR Houser, CS Barnhart, DR Boutz, SM Carroll, A Dasgupta, ... | | |
Predicting evolutionary site variability from structure in viral proteins: buriedness, flexibility, and design A Shahmoradi, DK Sydykova, SJ Spielman, EL Jackson, ET Dawson, ... | | |