Mass spec studio for integrative structural biology M Rey, V Sarpe, KM Burns, J Buse, CAH Baker, M van Dijk, L Wordeman, ... Structure 22 (10), 1538-1548, 2014 | 105 | 2014 |
High sensitivity crosslink detection coupled with integrative structure modeling in the mass spec studio V Sarpe, A Rafiei, M Hepburn, N Ostan, AB Schryvers, DC Schriemer Molecular & Cellular Proteomics 15 (9), 3071-3080, 2016 | 53 | 2016 |
Neprosin, a selective prolyl endoprotease for bottom-up proteomics and histone mapping CU Schräder, L Lee, M Rey, V Sarpe, P Man, S Sharma, V Zabrouskov, ... Molecular & Cellular Proteomics 16 (6), 1162-1171, 2017 | 48 | 2017 |
Lactoferrin binding protein B–a bi-functional bacterial receptor protein NKH Ostan, RH Yu, D Ng, CCL Lai, AK Pogoutse, V Sarpe, M Hepburn, ... PLoS pathogens 13 (3), e1006244, 2017 | 37 | 2017 |
Lindsay virtual human: Multi-scale, agent-based, and interactive C Jacob, S von Mammen, T Davison, A Sarraf-Shirazi, V Sarpe, ... Advances in Intelligent Modelling and Simulation: Artificial Intelligence …, 2012 | 29 | 2012 |
Improving spectral validation rates in hydrogen–Deuterium exchange data analysis S Raval, V Sarpe, M Hepburn, DA Crowder, T Zhang, R Viner, ... Analytical Chemistry 93 (9), 4246-4254, 2021 | 19 | 2021 |
Quantitative analysis of protein covalent labeling mass spectrometry data in the mass spec studio DS Ziemianowicz, V Sarpe, DC Schriemer Analytical chemistry 91 (13), 8492-8499, 2019 | 19 | 2019 |
Simulating the decentralized processes of the human immune system in a virtual anatomy model V Sarpe, C Jacob BMC bioinformatics 14, 1-18, 2013 | 18 | 2013 |
Supporting metabolomics with adaptable software: design architectures for the end-user V Sarpe, DC Schriemer Current opinion in biotechnology 43, 110-117, 2017 | 12 | 2017 |
HX‐MS 2 for high performance conformational analysis of complex protein states KM Burns, V Sarpe, M Wagenbach, L Wordeman, DC Schriemer Protein Science 24 (8), 1313-1324, 2015 | 10 | 2015 |
Swarm-based simulations for immunobiology: What can agent-based models teach us about the immune system? C Jacob, V Sarpe, C Gingras, RP Feyt Information processing and biological systems, 29-64, 2011 | 10 | 2011 |
Harmonizing structural mass spectrometry analyses in the mass spec studio DS Ziemianowicz, V Sarpe, DA Crowder, TJ Pells, S Raval, M Hepburn, ... Journal of proteomics 225, 103844, 2020 | 9 | 2020 |
Parametric evolution of a bacterial signalling system formalized by membrane computing V Sarpe, A Esmaeili, I Yazdanbod, T Kubik, M Richter, C Jacob IEEE Congress on Evolutionary Computation, 1-8, 2010 | 9 | 2010 |
Optimization of Swarm‐Based Simulations S von Mammen, A Sarraf Shirazi, V Sarpe, C Jacob International Scholarly Research Notices 2012 (1), 365791, 2012 | 7 | 2012 |
High-sensitivity proteome-scale searches for crosslinked peptides using CRIMP 2.0 DA Crowder, V Sarpe, BC Amaral, NI Brodie, ARM Michael, ... Analytical chemistry 95 (15), 6425-6432, 2023 | 5 | 2023 |
Apparatus for Automated Continuous Hydrogen Deuterium Exchange Mass Spectrometry Measurements from Milliseconds to Hours J Anacleto, C Lento, V Sarpe, A Maqsood, B Mehrazma, D Schriemer, ... Analytical Chemistry 95 (9), 4421-4428, 2023 | 4 | 2023 |
Data processing in bottom‐up hydrogen exchange mass spectrometry V Sarpe, DC Schriemer Hydrogen Exchange Mass Spectrometry of Proteins: Fundamentals, Methods, and …, 2016 | 3 | 2016 |
Automating data analysis for hydrogen/deuterium exchange mass spectrometry using data-independent acquisition methodology F Filandr, V Sarpe, S Raval, DA Crowder, MF Khan, P Douglas, S Coales, ... Nature communications 15 (1), 2200, 2024 | | 2024 |
Author Correction: Automating data analysis for hydrogen/deuterium exchange mass spectrometry using data-independent acquisition methodology F Filandr, V Sarpe, S Raval, DA Crowder, MF Khan, P Douglas, S Coales, ... nature communications 15, 2024 | | 2024 |
All-in-One Pseudo-MS3 Method for the Analysis of Gas-Phase Cleavable Protein Crosslinking Reactions NI Brodie, V Sarpe, DA Crowder, D Schriemer Journal of the American Society for Mass Spectrometry 34 (10), 2146-2155, 2023 | | 2023 |