MetaPhlAn2 for enhanced metagenomic taxonomic profiling DT Truong, EA Franzosa, TL Tickle, M Scholz, G Weingart, E Pasolli, ... Nature methods 12 (10), 902-903, 2015 | 2062 | 2015 |
Kernel PCA and de-noising in feature spaces S Mika, B Schölkopf, AJ Smola, KR Müller, M Scholz, G Rätsch Advances in neural information processing systems 11 (1), 536-542, 1999 | 1470 | 1999 |
Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3 F Beghini, LJ McIver, A Blanco-Míguez, L Dubois, F Asnicar, S Maharjan, ... elife 10, e65088, 2021 | 1172 | 2021 |
pcaMethods—a bioconductor package providing PCA methods for incomplete data W Stacklies, H Redestig, M Scholz, D Walther, J Selbig Bioinformatics 23 (9), 1164-1167, 2007 | 1141 | 2007 |
A diet low in FODMAPs reduces symptoms in patients with irritable bowel syndrome and a probiotic restores bifidobacterium species: a randomized controlled trial HM Staudacher, MCE Lomer, FM Farquharson, P Louis, F Fava, ... Gastroenterology 153 (4), 936-947, 2017 | 447 | 2017 |
Strain-level microbial epidemiology and population genomics from shotgun metagenomics M Scholz, DV Ward, E Pasolli, T Tolio, M Zolfo, F Asnicar, DT Truong, ... Nature methods 13 (5), 435-438, 2016 | 420 | 2016 |
Metabolite fingerprinting: detecting biological features by independent component analysis M Scholz, S Gatzek, A Sterling, O Fiehn, J Selbig Bioinformatics 20 (15), 2447-2454, 2004 | 350 | 2004 |
Studying vertical microbiome transmission from mothers to infants by strain-level metagenomic profiling F Asnicar, S Manara, M Zolfo, DT Truong, M Scholz, F Armanini, P Ferretti, ... MSystems 2 (1), e00164-16, 2017 | 340 | 2017 |
Bifidobacteria exhibit social behavior through carbohydrate resource sharing in the gut C Milani, GA Lugli, S Duranti, F Turroni, L Mancabelli, C Ferrario, ... Scientific reports 5 (1), 15782, 2015 | 281 | 2015 |
Non-linear PCA: a missing data approach M Scholz, F Kaplan, CL Guy, J Kopka, J Selbig Bioinformatics 21 (20), 3887-3895, 2005 | 272 | 2005 |
Nonlinear principal component analysis: neural network models and applications M Scholz, M Fraunholz, J Selbig Principal manifolds for data visualization and dimension reduction, 44-67, 2008 | 236 | 2008 |
Integration of metabolomic and proteomic phenotypes: analysis of data covariance dissects starch and RFO metabolism from low and high temperature compensation response in … S Wienkoop, K Morgenthal, F Wolschin, M Scholz, J Selbig, W Weckwerth Molecular & Cellular Proteomics 7 (9), 1725-1736, 2008 | 174 | 2008 |
Metagenomic sequencing with strain-level resolution implicates uropathogenic E. coli in necrotizing enterocolitis and mortality in preterm infants DV Ward, M Scholz, M Zolfo, DH Taft, KR Schibler, A Tett, N Segata, ... Cell reports 14 (12), 2912-2924, 2016 | 173 | 2016 |
Statistics of Narrow-Band Single Photons for Quantum Memories Generated<? format?> by Ultrabright Cavity-Enhanced Parametric Down-Conversion M Scholz, L Koch, O Benson Physical review letters 102 (6), 063603, 2009 | 171 | 2009 |
Heterosis manifestation during early Arabidopsis seedling development is characterized by intermediate gene expression and enhanced metabolic activity in the hybrids RC Meyer, H Witucka‐Wall, M Becher, A Blacha, A Boudichevskaia, ... The Plant Journal 71 (4), 669-683, 2012 | 147 | 2012 |
Nonlinear PCA: a new hierarchical approach. M Scholz, R Vigário Esann, 439-444, 2002 | 144 | 2002 |
Effects of diet-modulated autologous fecal microbiota transplantation on weight regain E Rinott, I Youngster, AY Meir, G Tsaban, H Zelicha, A Kaplan, D Knights, ... Gastroenterology 160 (1), 158-173. e10, 2021 | 130 | 2021 |
LC-MS based global metabolite profiling of grapes: solvent extraction protocol optimisation G Theodoridis, H Gika, P Franceschi, L Caputi, P Arapitsas, M Scholz, ... Metabolomics, 1-11, 2011 | 106 | 2011 |
Correlative GC-TOF-MS-based metabolite profiling and LC-MS-based protein profiling reveal time-related systemic regulation of metabolite–protein networks and improve pattern … K Morgenthal, S Wienkoop, M Scholz, J Selbig, W Weckwerth Metabolomics 1, 109-121, 2005 | 100 | 2005 |
A metabolomic approach to the study of wine micro-oxygenation P Arapitsas, M Scholz, U Vrhovsek, S Di Blasi, A Biondi Bartolini, ... PLoS One 7 (5), e37783, 2012 | 98 | 2012 |