| Whole-genome sequencing of acral melanoma reveals genomic complexity and diversity F Newell, JS Wilmott, PA Johansson, K Nones, V Addala, ... Nature communications 11 (1), 5259, 2020 | 118 | 2020 |
| Whole genome landscapes of uveal melanoma show an ultraviolet radiation signature in iris tumours PA Johansson, K Brooks, F Newell, JM Palmer, JS Wilmott, AL Pritchard, ... Nature Communications 11 (1), 2408, 2020 | 111 | 2020 |
| CD155 on tumor cells drives resistance to immunotherapy by inducing the degradation of the activating receptor CD226 in CD8+ T cells M Braun, AR Aguilera, A Sundarrajan, D Corvino, K Stannard, S Krumeich, ... Immunity 53 (4), 805-823. e15, 2020 | 100 | 2020 |
| Multiomic profiling of checkpoint inhibitor-treated melanoma: Identifying predictors of response and resistance, and markers of biological discordance F Newell, IP da Silva, PA Johansson, AM Menzies, JS Wilmott, V Addala, ... Cancer cell 40 (1), 88-102. e7, 2022 | 88 | 2022 |
| A catalogue of novel bovine long noncoding RNA across 18 tissues LT Koufariotis, YPP Chen, A Chamberlain, C Vander Jagt, BJ Hayes PloS one 10 (10), e0141225, 2015 | 88 | 2015 |
| Regulatory and coding genome regions are enriched for trait associated variants in dairy and beef cattle L Koufariotis, YPP Chen, S Bolormaa, BJ Hayes BMC genomics 15, 1-16, 2014 | 68 | 2014 |
| Sequencing the mosaic genome of Brahman cattle identifies historic and recent introgression including polled L Koufariotis, BJ Hayes, M Kelly, BM Burns, R Lyons, P Stothard, ... Scientific reports 8 (1), 17761, 2018 | 49 | 2018 |
| Verifying explainability of a deep learning tissue classifier trained on RNA-seq data M Yap, RL Johnston, H Foley, S MacDonald, O Kondrashova, KA Tran, ... Scientific reports 11 (1), 2641, 2021 | 46 | 2021 |
| Transcriptome dynamics of CD4+ T cells during malaria maps gradual transit from effector to memory MSF Soon, HJ Lee, JA Engel, J Straube, BS Thomas, CPS Pernold, ... Nature Immunology 21 (12), 1597-1610, 2020 | 46 | 2020 |
| DNA methylation patterns identify subgroups of pancreatic neuroendocrine tumors with clinical association V Lakis, RT Lawlor, F Newell, AM Patch, A Mafficini, A Sadanandam, ... Communications biology 4 (1), 155, 2021 | 38 | 2021 |
| Comparative genomics provides etiologic and biological insight into melanoma subtypes F Newell, PA Johansson, JS Wilmott, K Nones, V Lakis, AL Pritchard, ... Cancer discovery 12 (12), 2856-2879, 2022 | 30 | 2022 |
| Comprehensive genomic and tumour immune profiling reveals potential therapeutic targets in malignant pleural mesothelioma J Creaney, AM Patch, V Addala, SA Sneddon, K Nones, IM Dick, YCG Lee, ... Genome medicine 14 (1), 58, 2022 | 30 | 2022 |
| Non-coding RNAs underlie genetic predisposition to breast cancer M Moradi Marjaneh, J Beesley, TA O’Mara, P Mukhopadhyay, ... Genome biology 21, 1-14, 2020 | 28 | 2020 |
| CRISPR/Cas9-mediated genome editing of Schistosoma mansoni acetylcholinesterase H You, JU Mayer, RL Johnston, H Sivakumaran, S Ranasinghe, V Rivera, ... bioRxiv, 2020.07. 08.190694, 2020 | 28 | 2020 |
| Patient-derived xenograft models capture genomic heterogeneity in endometrial cancer VF Bonazzi, O Kondrashova, D Smith, K Nones, AT Sengal, R Ju, ... Genome Medicine 14, 1-19, 2022 | 25 | 2022 |
| Radiomics biomarkers correlate with CD8 expression and predict immune signatures in melanoma patients LG Aoude, BZY Wong, VF Bonazzi, S Brosda, SB Walters, LT Koufariotis, ... Molecular Cancer Research 19 (6), 950-956, 2021 | 22 | 2021 |
| IL-10-producing Th1 cells possess a distinct molecular signature in malaria CL Edwards, SS Ng, F de Labastida Rivera, D Corvino, JA Engel, ... The Journal of clinical investigation 133 (1), 2023 | 19 | 2023 |
| Donor bone marrow–derived macrophage MHC II drives neuroinflammation and altered behavior during chronic GVHD in mice RC Adams, D Carter-Cusack, SN Shaikh, GT Llanes, RL Johnston, ... Blood, The Journal of the American Society of Hematology 139 (9), 1389-1408, 2022 | 18 | 2022 |
| Alterations in signaling pathways that accompany spontaneous transition to malignancy in a mouse model of BRAF mutant microsatellite stable colorectal cancer AM Kane, LJ Fennell, C Liu, J Borowsky, DM McKeone, CE Bond, ... Neoplasia 22 (2), 120-128, 2020 | 17 | 2020 |
| Pathogenic germline variants are associated with poor survival in stage III/IV melanoma patients LG Aoude, VF Bonazzi, S Brosda, K Patel, LT Koufariotis, H Oey, K Nones, ... Scientific Reports 10 (1), 17687, 2020 | 16 | 2020 |
