| Version 4.0 of PaxDb: protein abundance data, integrated across model organisms, tissues, and cell‐lines M Wang, CJ Herrmann, M Simonovic, D Szklarczyk, C von Mering Proteomics 15 (18), 3163-3168, 2015 | 606 | 2015 |
| PolyASite 2.0: a consolidated atlas of polyadenylation sites from 3′ end sequencing CJ Herrmann, R Schmidt, A Kanitz, P Artimo, AJ Gruber, M Zavolan Nucleic acids research 48 (D1), D174-D179, 2020 | 172 | 2020 |
| An In Vivo EGF Receptor Localization Screen in C. elegans Identifies the Ezrin Homolog ERM-1 as a Temporal Regulator of Signaling A Haag, P Gutierrez, A Bühler, M Walser, Q Yang, M Langouët, ... PLoS genetics 10 (5), e1004341, 2014 | 43 | 2014 |
| CFIm-mediated alternative polyadenylation remodels cellular signaling and miRNA biogenesis S Ghosh, M Ataman, M Bak, A Börsch, A Schmidt, K Buczak, G Martin, ... Nucleic acids research 50 (6), 3096-3114, 2022 | 18 | 2022 |
| Extensible benchmarking of methods that identify and quantify polyadenylation sites from RNA-seq data S Bryce-Smith, D Burri, MR Gazzara, CJ Herrmann, W Danecka, ... RNA 29 (12), 1839-1855, 2023 | 9 | 2023 |
| ZARP: An automated workflow for processing of RNA-seq data M Katsantoni, F Gypas, CJ Herrmann, D Burri, M Bak, P Iborra, K Agarwal, ... bioRxiv, 2021.11. 18.469017, 2021 | 4 | 2021 |
| ZARP: A user-friendly and versatile RNA-seq analysis workflow M Katsantoni, F Gypas, CJ Herrmann, D Burri, M Bąk, P Iborra, K Agarwal, ... F1000Research 13, 533, 2024 | | 2024 |
