Batch effect removal methods for microarray gene expression data integration: a survey C Lazar, S Meganck, J Taminau, D Steenhoff, A Coletta, C Molter, ... Briefings in bioinformatics 14 (4), 469-490, 2013 | 360 | 2013 |
Human cancer cell lines: Experimental models for cancer cells in situ? For cancer stem cells? WCG Van Staveren, DYW Solís, A Hebrant, V Detours, JE Dumont, ... Biochimica et Biophysica Acta (BBA)-Reviews on Cancer 1795 (2), 92-103, 2009 | 300 | 2009 |
Low-complexity regions within protein sequences have position-dependent roles A Coletta, JW Pinney, DYW Solís, J Marsh, SR Pettifer, TK Attwood BMC systems biology 4, 1-13, 2010 | 265 | 2010 |
Unlocking the potential of publicly available microarray data using inSilicoDb and inSilicoMerging R/Bioconductor packages J Taminau, S Meganck, C Lazar, D Steenhoff, A Coletta, C Molter, ... BMC bioinformatics 13, 1-9, 2012 | 189 | 2012 |
Human thyroid tumor cell lines derived from different tumor types present a common dedifferentiated phenotype WCG van Staveren, DW Solís, L Delys, L Duprez, G Andry, B Franc, ... Cancer research 67 (17), 8113-8120, 2007 | 139 | 2007 |
Genome-wide gene expression profiling suggests distinct radiation susceptibilities in sporadic and post-Chernobyl papillary thyroid cancers V Detours, L Delys, F Libert, D Weiss Solis, T Bogdanova, JE Dumont, ... British Journal of Cancer 97 (6), 818-825, 2007 | 91 | 2007 |
Gene expression in human thyrocytes and autonomous adenomas reveals suppression of negative feedbacks in tumorigenesis WCG van Staveren, DW Solís, L Delys, D Venet, M Cappello, G Andry, ... Proceedings of the National Academy of Sciences 103 (2), 413-418, 2006 | 63 | 2006 |
InSilico DB genomic datasets hub: an efficient starting point for analyzing genome-wide studies in GenePattern, Integrative Genomics Viewer, and R/Bioconductor A Coletta, C Molter, R Duqué, D Steenhoff, J Taminau, V De Schaetzen, ... Genome biology 13, 1-13, 2012 | 51 | 2012 |
inSilicoDb: an R/Bioconductor package for accessing human Affymetrix expert-curated datasets from GEO J Taminau, D Steenhoff, A Coletta, S Meganck, C Lazar, V de Schaetzen, ... Bioinformatics 27 (22), 3204-3205, 2011 | 48 | 2011 |
Long-term EGF/serum-treated human thyrocytes mimic papillary thyroid carcinomas with regard to gene expression A Hébrant, WCG van Staveren, L Delys, DW Solís, T Bogdanova, G Andry, ... Experimental cell research 313 (15), 3276-3284, 2007 | 30 | 2007 |
Crowdsourced direct-to-consumer genomic analysis of a family quartet M Corpas, W Valdivia-Granda, N Torres, B Greshake, A Coletta, A Knaus, ... BMC genomics 16, 1-16, 2015 | 18 | 2015 |
GENESHIFT: a nonparametric approach for integrating microarray gene expression data based on the inner product as a distance measure between the distributions of genes C Lazar, J Taminau, S Meganck, D Steenhoff, A Coletta, DYW Solis, ... IEEE/ACM transactions on computational biology and bioinformatics 10 (2 …, 2013 | 9 | 2013 |
Package ‘inSilicoMerging’ J Taminau, MJ Taminau, S Meganck, S BiocGenerics March, 2013 | 4 | 2013 |
Validation of Merging Techniques for Cancer Microarray Data Sets J Taminau, S Meganck, DY Weiss-Solis, WCG Van Staveren, G Dom, ... Australian Journal of Intelligent Information Processing Systems 10 (4), 4, 2010 | 3 | 2010 |
Sequential application of feature selection and extraction for predicting breast cancer aggressiveness J Taminau, S Meganck, C Lazar, DY Weiss-Solis, A Coletta, N Walker, ... Computational Systems-Biology and Bioinformatics: First International …, 2010 | 2 | 2010 |
A complete public domain family genomics dataset M Corpas, M Cariaso, A Coletta, D Weiss, A Harrison, F Moran, H Yang bioRxiv, 000216, 2013 | 1 | 2013 |
InSilico DB: an online platform to collaboratively structure and export publicly available datasets from the Gene Expression Omnibus database A Coletta, C Molter, R Duqué, D Steenhoff, J Taminau, V de Schaetzen, ... Genome Biology 12 (Suppl 1), P33, 2011 | 1 | 2011 |
Epigenetic compounds have minor effects on differentiation in human thyroid cancer cell lines but induce expression of genes involved in in vitro adaptation G Dom, V Chico Galdo, G Tomás, L Delys, G Andry, D Weiss Solís, ... | | 2011 |
Analysis of genomewide expression profiles of thyroid tumors and of their in vitro models D Weiss Solís | | 2009 |
PP48 A proliferation measure integrates the outcome-related information contained in the breast cancer transcriptome V Detours, D Venet, D Weiss-Solis, H Bersini, J Dumont, C Maenhaut EJC Supplements 4 (7), 16, 2009 | | 2009 |