Structure and dynamics of core/periphery networks P Csermely, A London, LY Wu, B Uzzi Journal of Complex Networks 1 (2), 93-123, 2013 | 434 | 2013 |
iSNO-PseAAC: predict cysteine S-nitrosylation sites in proteins by incorporating position specific amino acid propensity into pseudo amino acid composition Y Xu, J Ding, LY Wu, KC Chou PloS one 8 (2), e55844, 2013 | 413 | 2013 |
Semi-supervised drug-protein interaction prediction from heterogeneous biological spaces Z Xia, LY Wu, X Zhou, STC Wong BMC systems biology 4 (2), 1-16, 2010 | 340 | 2010 |
iSNO-AAPair: incorporating amino acid pairwise coupling into PseAAC for predicting cysteine S-nitrosylation sites in proteins Y Xu, XJ Shao, LY Wu, NY Deng, KC Chou PeerJ 1, e171, 2013 | 303 | 2013 |
iNitro-Tyr: Prediction of nitrotyrosine sites in proteins with general pseudo amino acid composition Y Xu, X Wen, LS Wen, LY Wu, NY Deng, KC Chou PloS one 9 (8), e105018, 2014 | 261 | 2014 |
Capacitated facility location problem with general setup cost LY Wu, XS Zhang, JL Zhang Computers & Operations Research 33 (5), 1226-1241, 2006 | 219 | 2006 |
Haplotype reconstruction from SNP fragments by minimum error correction RS Wang, LY Wu, ZP Li, XS Zhang Bioinformatics 21 (10), 2456-2462, 2005 | 191 | 2005 |
Prediction of protein–RNA binding sites by a random forest method with combined features ZP Liu, LY Wu, Y Wang, XS Zhang, L Chen Bioinformatics 26 (13), 1616-1622, 2010 | 166 | 2010 |
Efficient methods for identifying mutated driver pathways in cancer J Zhao, S Zhang, LY Wu, XS Zhang Bioinformatics 28 (22), 2940-2947, 2012 | 161 | 2012 |
NOA: a novel Network Ontology Analysis method J Wang, Q Huang, ZP Liu, Y Wang, LY Wu, L Chen, XS Zhang Nucleic acids research 39 (13), e87-e87, 2011 | 114 | 2011 |
Discovery of co-occurring driver pathways in cancer J Zhang, LY Wu, XS Zhang, S Zhang BMC bioinformatics 15, 1-14, 2014 | 97 | 2014 |
Prediction of palmitoylation sites using the composition of k-spaced amino acid pairs XB Wang, LY Wu, YC Wang, NY Deng Protein Engineering, Design & Selection 22 (11), 707-712, 2009 | 90 | 2009 |
Predicting DNA-and RNA-binding proteins from sequences with kernel methods X Shao, Y Tian, L Wu, Y Wang, L Jing, N Deng Journal of Theoretical Biology 258 (2), 289-293, 2009 | 84 | 2009 |
iSuc-PseAAC: predicting lysine succinylation in proteins by incorporating peptide position-specific propensity Y Xu, YX Ding, J Ding, YH Lei, LY Wu, NY Deng Scientific reports 5 (1), 1-6, 2015 | 77 | 2015 |
Cancer stem cells display extremely large evolvability: alternating plastic and rigid networks as a potential mechanism: network models, novel therapeutic target strategies … P Csermely, J Hódsági, T Korcsmáros, D Módos, ÁR Perez-Lopez, ... Seminars in cancer biology 30, 42-51, 2015 | 74 | 2015 |
Haplotype assembly from aligned weighted SNP fragments YY Zhao, LY Wu, JH Zhang, RS Wang, XS Zhang Computational Biology and Chemistry 29 (4), 281-287, 2005 | 72 | 2005 |
Lysine acetylation sites prediction using an ensemble of support vector machine classifiers Y Xu, XB Wang, J Ding, LY Wu, NY Deng Journal of Theoretical Biology 264 (1), 130-135, 2010 | 71 | 2010 |
Models and algorithms for haplotyping problem XS Zhang, RS Wang, LY Wu, L Chen Current Bioinformatics 1 (1), 105-114, 2006 | 70 | 2006 |
Potts model based on a Markov process computation solves the community structure problem effectively HJ Li, Y Wang, LY Wu, J Zhang, XS Zhang Physical Review E 86 (1), 016109, 2012 | 62 | 2012 |
Inferring protein interactions from experimental data by association probabilistic method L Chen, LY Wu, Y Wang, XS Zhang Proteins: Structure, Function, and Bioinformatics 62 (4), 833-837, 2006 | 61 | 2006 |