| HiFiAdapterFilt, a memory efficient read processing pipeline, prevents occurrence of adapter sequence in PacBio HiFi reads and their negative impacts on genome assembly SB Sim, RL Corpuz, TJ Simmonds, SM Geib BMC genomics 23 (1), 157, 2022 | 89 | 2022 |
| Rapid viral symbiogenesis via changes in parasitoid wasp genome architecture GR Burke, TJ Simmonds, BJ Sharanowski, SM Geib Molecular biology and evolution 35 (10), 2463-2474, 2018 | 46 | 2018 |
| The USDA-ARS Ag100Pest initiative: high-quality genome assemblies for agricultural pest arthropod research AK Childers, SM Geib, SB Sim, MF Poelchau, BS Coates, TJ Simmonds, ... Insects 12 (7), 626, 2021 | 40 | 2021 |
| Microplitis demolitor bracovirus proviral loci and clustered replication genes exhibit distinct DNA amplification patterns during replication GR Burke, TJ Simmonds, SA Thomas, MR Strand Journal of virology 89 (18), 9511-9523, 2015 | 33 | 2015 |
| Characterization of a venom gland-associated rhabdovirus in the parasitoid wasp Diachasmimorpha longicaudata TJ Simmonds, D Carrillo, GR Burke Journal of insect physiology 91, 48-55, 2016 | 22 | 2016 |
| Niche conservatism for ecological preference in the Louisiana iris species complex JAP Hamlin, TJ Simmonds, ML Arnold Biological Journal of the Linnean Society 120 (1), 144-154, 2017 | 9 | 2017 |
| A unified protocol for CRISPR/Cas9-mediated gene knockout in tephritid fruit flies led to the recreation of white eye and white Puparium phenotypes in the melon fly DF Paulo, AY Cha, AN Kauwe, K Curbelo, RL Corpuz, TJ Simmonds, ... Journal of Economic Entomology 115 (6), 2110-2115, 2022 | 8 | 2022 |
| A chromosome scale assembly of the parasitoid wasp Venturia canescens provides insight into the process of virus domestication M Mao, TJ Simmonds, CM Stouthamer, TM Kehoe, SM Geib, GR Burke G3: Genes, Genomes, Genetics 13 (10), jkad137, 2023 | 1 | 2023 |
| otb: an Automated HiC/HiFi Pipeline Assembles the Prosapia bicincta Genome DC Molik, AR Stahlke, SP Sharma, TJ Simmonds, RL Corpuz, AN Kauwe, ... G3: Genes, Genomes, Genetics, jkae129, 2024 | | 2024 |
| otb: Creating a HiC/HiFi Pipeline to Assemble the Prosapia bicincta Genome D Molik, AR Stahlke, SP Sharma, TJ Simmonds, RL Corpuz, AN Kauwe, ... EcoEvoRxiv, 2023 | | 2023 |
| otb: an Automated HiC/HiFi Pipeline Assembles the D Molik, A Stahlke, S Sharma, T Simmonds, R Corpuz, A Kauwe, ... | | 2023 |
| Assessment of the Microbial Communities of Blepharoneura Flies and Their Bellopius Parasitoids from French Guiana TJ Simmonds University of Georgia, 2020 | | 2020 |
| Bidirectional lethality: Lethal parasitoids and lethal prey-tritrophic interactions of tephritid (Diptera: Tephritidae) flies, host plants (Curcurbitaceae) and parasitoids … MA Condon, IS Winkler, N Theis, GR Burke, TJ Simmonds, RK Bagley, ... Entomology 2018, 2018 | | 2018 |
| Assessment of the role of Wolbachia in Blepharoneura flies and their Bellopius parasitoids from the Neotropics TJ Simmonds, MA Condon, GR Burke Entomology 2017, 2017 | | 2017 |
Scott GeibUSDA-ARS Pacific Basin Agricultural Research Center在 ars.usda.gov 的电子邮件经过验证
